Tetraodon nigroviridis (spotted green pufferfish): GSTEN00033034G001
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Entry
GSTEN00033034G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K16498
protocadherin delta 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
GSTEN00033034G001
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tng01009
]
GSTEN00033034G001
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00033034G001
Protein phosphatases and associated proteins [BR:
tng01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
GSTEN00033034G001
Cell adhesion molecules [BR:
tng04515
]
Cadherins
Protocadherins
GSTEN00033034G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Motif
Other DBs
NCBI-ProteinID:
CAG11168
UniProt:
Q4RKB4
LinkDB
All DBs
Position
18
AA seq
1521 aa
AA seq
DB search
MGGGGGSAVFSSISAAAALRCSASRPKKRRAESKPLPHPSNLREGIRELGTLFHCGKEGK
KTQLDRKVNSAAPDLGQQCAESLEEEAPRTQVFSGSAHRGKNGKAIGQADNGRRREAGEG
RREGAMQRLGAVHSSVAQAVGIVVLVLQLLTQLPGANSALRYRVAEEGPPDVKIGNVAAD
LGLTAGTGSGDVTFALESGSEYFKIDNVTGELTTGPRRIDREKLPQCQMIFDENECFLDF
EVSVIGPLQSWVDLFEGRVVITDINDNTPSFPSPEPFTCFPPRQTGILAEMALTDMNSFR
MVQLEQLQPDAQREGSPITRVEALGDRRGRNGENGGARSTVFKLQVADIPDGEKQPQLIV
KGTLDREQKDSYELILRVRDGGNPPRSSQALLRVSITDVNDNSPQFERSTYEAEMAENAP
PGTPVLQVRASDRDVGVNGQVEYVFGAATESVRRLLRLDEATGWLSVLHRIDREEVAQLR
FTVTARDRGQPPRTDRTTVVLAVRDENDNVPVVEIRKIGRIPVRDGAALVPENVLVDTPV
ALVQVSDRDQGENGAVTCTVVGDVPFTLKPAGETVLPPLPAEDAFDRNKKKYFLHTSALL
DYETTKEYSVTIVAVDSGSPSLSSNSSLMVRVVDINDHPPIFAQSVVEVHFAENNSPGER
VVTVVATDADSGKNAEIAFSLDPAGNGPFYIDADNGDIRATGVLDREQRERYELRVIAKD
KGTPSLQGSATVVIQVTDRNDNAPKFAQEIFTFYVKENLLANSPVGMVTVTDADEGENAE
LSLFVEIGGPEERKMVGSTEDEDAEKGQEEMFSIENNTGTIFSSASFDREKLSIYTFRVR
AVDGGEPRKTATATVSLFVTDENDNAPSITSPANESYTLLPPASSARTVVRTVKAVDSDS
GLNADLRYALVGGNPYRLFEIGHTNGVITLAEPLERRHRGLHRLVVRVTDSGIPSLCATA
LVHIFINDSLANASLVEAQIARSLAAPLSLDIAGDPDSDRSLGKQRLSVAIGVLAGAAAV
ILVILLVVTARQCGAQGKNGYEAGKKEPEEDFFSPSGAQPQVSRGRGSDRGRKPRRDKRT
GSSGGVSAGGGKSDRSLYSGIVTVNGLRRHANDDEEEELSSASDRLAARYCVVDDDPGSP
RMGSGRRHQSSPDLARHYKSSSPLPAVNLQPHSPPAEGKKHQAVQDLPPSNTFVGSGGCV
GSAGSSSSSSGGSGNGDAMSVGSDQCSEYGCHTGNKYNKQCQTKIPDILVAHRLVSSTFL
NLDIVQHGDYHSTHRGTLRRVTFSVVSQPQDGGCYDSGLEDSETPSSKSSSGPRLGALPL
PEEGYERTTPEGSVGEEEHVENDARQLPDVALTGKCTRDCDEFGHSDTCWMPIRPSPRQR
QRHGSDPPRLSTFAPGDDNNNLRRNDHESDSGNAGSAGSSEPGVVVSSEGQRLPLANGDP
LSTLGRGDRNRNVGDKNRNLLNRKMTSASYDTFSSAGLGRRQQEEEVGEGQNPTEVIPLT
RTGGDYKTTSCLTLSRREVYL
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atggggggaggggggggatcggcggtgttcagcagcatcagcgccgctgctgcattgcgc
tgctcagcgagcaggccgaagaaaagaagagcagaaagtaagccgctcccgcatccttct
aacttgcgcgaaggtatccgggagcttggcacgttgttccactgcgggaaagaggggaag
aaaacgcaactggatcgcaaggtgaactccgctgctccggacctcgggcagcagtgcgca
gagagcttggaggaagaggcaccaaggacccaggttttttcgggctcagcacatcgaggg
aagaacgggaaggcgatcgggcaggcagataacgggagaaggagagaggcgggagaggga
cggagagaaggagccatgcagaggcttggtgcagtgcactcctccgtggcgcaggctgtc
ggcatcgtggtcttagtgctgcagctgctgactcagctaccgggagccaactccgctcta
aggtaccgggtggcggaggagggccctcctgatgtcaagattggaaatgtggccgccgac
ctgggcctgactgcgggcacgggcagcggggatgtcacattcgccctggagagtggttcc
gaatacttcaagattgacaatgtgacaggggagctgacgacggggcccaggcgcattgac
agagagaaacttccacaatgtcagatgatatttgatgaaaatgagtgtttcttggacttt
gaggtatccgtgatagggcccctgcagagctgggtggacctgtttgaaggccgtgtggtc
ataactgacatcaatgacaacacaccttcttttccctcaccggaaccctttacctgcttc
ccaccgcgacaaaccgggattttggccgaaatggcattaaccgatatgaactcattcagg
atggtgcagctggagcaacttcaaccagacgcgcagagggaggggagccccattacaaga
gtggaggcactcggggaccgaagagggaggaatggggagaacggcggagcgaggagcact
gtgtttaaactacaggtcgctgacatacctgatggtgaaaaacagcctcagctgattgta
aaaggcacattagatcgggagcagaaagactcatatgagctcatccttagggtccgagat
ggagggaacccaccccggtcctcccaagccttgctccgtgtgtctattactgacgtgaat
gacaacagcccacagtttgagaggtcaacgtatgaggctgaaatggcagaaaacgcccct
ccggggacgcctgtcctccaggtcagagcatctgaccgagatgttggagttaacggccag
gtggagtacgtcttcggagctgctactgaatccgtcagacgtctcctcagactggacgag
gctaccggatggctgagcgttctccacaggatcgacagagaagaagtggctcaactgagg
ttcacggtgacggccagagaccgaggtcagccaccccgcaccgatcgcaccacggtagtc
ttggctgtgcgggatgagaacgacaacgtcccagtcgtggagatccggaagatcggacgg
atccccgttcgagatggagcagcactggtgccagagaacgtcctggtggacacgccagtg
gctctggtgcaagtgtcagacagagatcagggagagaatggggccgtgacctgtacagtg
gtaggagatgtgccgttcaccctgaagccagcgggtgagacagttcttccaccccttcct
gcagaagacgcctttgacaggaataagaaaaaatacttcttacacacctctgccctgctg
gactatgagaccaccaaagagtacagtgtgaccattgtggcagtagattctggtagcccc
agtctgtccagtaacagctcactgatggtgcgggtcgtggacatcaacgatcaccctccc
atctttgcccagagtgtcgtcgaagtgcactttgctgaaaataactcccctggagagaga
gtagtcaccgttgtagccacagacgcagacagcggcaagaatgcagagatcgcgttttct
ctggaccccgctggcaatgggcccttttacattgacgcagataacggggatatccgtgca
accggagtcctggaccgtgagcagcgggagaggtatgaactgagggttatcgccaaggat
aagggcactccgtctctgcaaggctcagcaactgttgtcattcaggtgaccgaccgcaat
gacaacgcgccaaagtttgcgcaggaaattttcacattctatgtgaaagagaacctgctt
gccaacagcccagttggcatggttaccgtgaccgacgctgacgaaggtgagaatgccgaa
cttagtctgtttgtagaaataggtggccccgaagagaggaagatggtgggatcaacggaa
gatgaggatgccgagaaagggcaggaagagatgttttccatagagaacaataccgggacc
attttctcatcggcgtcatttgaccgtgagaagctttccatctacaccttccgggttcga
gctgtggatggaggggaacctcgaaaaactgccacagctacagtgtcactttttgtgaca
gatgaaaacgacaacgccccttccatcacctccccagccaatgagtcctacaccctcctt
ccacctgctagcagcgcccgcaccgttgtcaggacggtcaaagctgtggactcggacagc
ggcctcaacgcagacctacgctatgcccttgtgggggggaacccctacagactgtttgag
attggccacaccaatggagtgatcaccctggcggagcctctggagcggcgccatagaggt
ctgcatcgcctggtggtccgggtcacagatagcgggatcccatcgctctgtgccactgct
ttggttcacatcttcatcaacgacagcttggccaacgcctcgctcgtagaagcacagatt
gcccgtagcctggcagccccattatcgctcgacatcgcaggcgaccctgacagcgatcgt
tcgcttgggaagcagcgtctcagcgtcgccattggtgtcctggcgggggctgccgctgtc
atcttggtcatcctgcttgtagtcacggcccgccagtgtggcgctcagggcaagaacggg
tacgaggctggcaagaaggagccggaggaagacttcttcagtccttcgggagctcagcca
caggtgagccgtggcaggggatcggaccgtggacgcaaacctcggcgggataagcgtact
ggaagtagtggcggcgtgtccgctggaggagggaagtccgacaggtcgctttacagcggc
atcgtcacggtcaacgggctgcgtcgccatgccaatgatgatgaagaagaggaactgagc
agtgccagtgaccgcctggcagcccgctattgtgtcgtggatgatgacccgggcagcccg
cggatgggcagcggcaggaggcaccagtcgagcccagatctggcgaggcactacaaatcc
agctcaccgctcccagctgtgaatctgcagccacactctcccccagctgaggggaagaag
caccaggcggtccaggacctgcctccctccaacacttttgtgggcagtgggggctgtgtg
ggcagcgccggctccagcagcagcagcagtggaggcagtggcaatggagacgccatgtcc
gtgggatcagaccagtgctcagagtatggctgccacaccgggaacaagtacaacaaacag
tgccaaacaaagattccagacattttagttgcccatcgactggtttcatccacgttttta
aaccttgacatagtgcagcacggtgattatcattccactcacagagggacccttcgccga
gtgaccttctcggtggtcagccagcctcaggacggcggttgttatgacagcggcctggag
gattcggagactcccagcagcaagagttcatctgggccacgcctgggagccctgccgctt
cctgaggaaggctacgagcggaccacaccggagggcagcgtcggcgaagaagagcatgtg
gaaaatgatgcaaggcaactgcctgacgtcgcgctgactggaaaatgtaccagggactgt
gatgagtttggccactctgatacttgctggatgcccattcggccctcacctcgccagcgt
caacgtcacggcagcgaccctccaaggctctcaacctttgctccaggagacgataacaac
aacctccgccgtaatgatcacgagagcgacagcgggaacgctggcagtgcgggcagctcg
gaacccggcgttgtcgtcagcagcgaaggtcagagattaccgctagccaacggcgaccct
ctcagcaccctcggtagaggagatcgcaacaggaacgtgggcgataaaaaccgcaacctt
ctgaaccgcaagatgacctcagcgtcctacgacacgttcagcagcgcgggcctcggacgg
cgccaacaagaggaggaagtgggagagggccagaatccgactgaggtcattccgctgacg
cggacaggaggggactacaagaccacgtcctgcctcacgctgtcacgccgcgaggtctac
ctgtga
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integrated database retrieval system
