Tetraodon nigroviridis (spotted green pufferfish): GSTEN00033161G001
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Entry
GSTEN00033161G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tng03041
]
GSTEN00033161G001
Enzymes [BR:
tng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GSTEN00033161G001
Spliceosome [BR:
tng03041
]
Complex C
Other components
Complex C specific factors
GSTEN00033161G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
Helicase_C
HA2_N
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CAG11252
UniProt:
Q4RK30
LinkDB
All DBs
Position
9
AA seq
559 aa
AA seq
DB search
MAAPRSTMKFWKPGTEAPGISEERELNTETSGSTIVYNPHTALSIERQRQKLPVFKYLLE
AGWATEGKVIGVTQPRRVAAVSVANRVAEERGALLGHEVGYTIRFDDCSDVHATRIKFLT
DGMLVREMMSDPLLKKYSVLMLDEAHERTLYTDIAIGLLKKIQKKRQDLRLIVASATLDA
MKFHNFFNLNETGDPSKDTCGILTVEGRTFPVDIFYTVSPVPDYVKATVETVVKIHEADE
DGDVLAFLTGQEEVEKVVSLLQEQARTMSRQGMKKHLRILPMYSGLPYPDQMKVFDRVPP
TVRKVVVATNIAETSITINGIVFVIDCAFVKLRAYNPHSAIESLVVTPISKASASQRAGR
AGRNRPGKCFRLYTEEDFEKLPASTVPEMQRSNLAPVILQLKALGIDNVLRFSFLSPPPA
QTMVQALELLYALGGKNQSFQNNIKEKPIPLLRCPCRHVGSLRVVVLPAGLDNYGRLTDP
MGLRMAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFIVPPNQKKAAAKEHRMF
AVAEGDHLTMLNVYEAFIF
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcggctccccgtagcaccatgaaattttggaaaccggggaccgaagctccggggatc
tcggaggaacgggagctcaacacggaaacctccgggtccaccatcgtctataacccgcac
accgccctctccatagagagacagcgtcagaaactgcccgttttcaagtacctcctggag
gctgggtgggcaacagaagggaaagttattggcgtgacacagcctcggcgtgtagctgct
gtctctgtagccaaccgcgtcgcagaagagcgcggtgccctgctggggcatgaggtgggc
tacaccatcagatttgacgactgctctgatgtgcacgctacacggatcaagttcctcaca
gatggaatgctggtacgggagatgatgtcagaccctctcctgaaaaaatatagtgttttg
atgttagatgaagcacacgagagaaccttgtacacagacatagccattggcctccttaaa
aagattcagaaaaagcggcaagacctgaggctgattgtggcatctgcaacgctggatgcc
atgaaatttcacaattttttcaacctgaatgaaaccggagaccccagcaaggacacgtgt
ggaattctgacagtggagggacgcacgtttcctgtggacatcttctacactgtcagtcca
gtcccagactatgtgaaggccacagtggagacagttgtgaagattcacgaggcagatgaa
gacggagacgtcctggcatttctcaccggacaggaagaagtggagaaagtggtctcactt
ctgcaggagcaggccaggactatgtcaagacagggcatgaagaaacacctccgaattttg
cccatgtactctgggctgccttaccctgaccagatgaaggtcttcgaccgggttcccccg
actgttcgcaaggttgtggtggccacgaacatagctgagacttccattactattaatggg
atcgtgttcgtcattgactgcgcatttgtaaagctgcgggcctacaatccccacagcgcc
atcgaatcactggtggtcacacccatctcaaaggcttcagccagccagagagcaggaaga
gctggacgaaaccgtccggggaaatgcttccggctatacacagaggaagactttgagaaa
ctgcctgcgtctacggtgccagagatgcagcgcagcaatttggctcccgtcatcctgcag
ctcaaagctttaggcattgacaacgtgctgcgcttcagctttctttcacctcctccagct
cagacaatggtccaggctcttgagctactctacgctttgggaggtaagaaccaaagcttt
caaaataatataaaagaaaaaccaatccctttgcttagatgtccttgcagacatgtggga
tctttaagggttgttgttctcccggcaggcttggacaactatggccgtttgaccgatccc
atgggcctgcgcatggcagagtttcctctcagccccatgtttgccaagatgcttctcgag
tcgggcaattttggctgctccaaagagatcgttaccatcgcagcgatgatgcagatccag
aacatatttatcgtgccgcctaatcagaagaaagcggctgccaaagagcacaggatgttt
gccgtggctgaaggagaccacctcaccatgctgaacgtgtacgaagctttcattttt
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