Tetraodon nigroviridis (spotted green pufferfish): GSTEN00033253G001
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Entry
GSTEN00033253G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GSTEN00033253G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00033253G001
Enzymes [BR:
tng01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GSTEN00033253G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GSTEN00033253G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
SBP
O-antigen_lig
Motif
Other DBs
NCBI-ProteinID:
CAG11321
UniProt:
Q4RJW1
LinkDB
All DBs
Position
9
AA seq
385 aa
AA seq
DB search
MAKHAVLSSGSKVWRSLPCTKSELRLDLTLECGQSFRWRETAEGHWTGVMKGRVWTLTQT
EDTLWFHVYENQERQSKTQDRKRRASVSVQEDEPRKKFQSQVKKEDGEPLDVPLLQDYRE
EKEMLRDYFQLDVNLGDLYKKWGDADPHFRSIANVFTGVRMLRQDPTECLFSFICTSNNH
ISRIQGMVERLCQALGTPLCKLDQTTYYSYPSLSALSGSSVEARLRDLGFGYRARFLQQS
AKQIQDAHGMQWLDGLRTVPYVQAREALRTLPGVGTKVADCVCLMSLDKAEAVPVDTHVW
QIAKRDYNCAFGNHQKSLTDKLHRDIGDFFRALWGSYAGWAQSVLFCSDLKKFQKLKETS
HLKQSCKMEDTEAEMRKEKTIIKTE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacacgcagtgctgtcgtcggggtcgaaagtgtggagatctttgccctgcact
aagtcggagctacgtctggatctcacccttgaatgtggacagtcttttcgatggagggaa
actgcagaaggtcactggacaggagtgatgaaaggacgagtttggactctgacccagaca
gaagacactctttggttccacgtttacgagaaccaagaaaggcagagcaagacgcaggac
aggaagaggagagctagtgtttctgtccaggaagacgagccaaggaagaaattccaaagc
caagtcaagaaggaagatggagagcctctggatgttccgctcctgcaagattacagggag
gaaaaggagatgctgagagattactttcagctggacgtgaacttgggtgatctgtacaaa
aaatggggagatgcagatccacactttagatccattgcgaatgttttcacaggtgtgcga
atgctgcgacaggaccccaccgaatgcctgttttcgttcatttgcacctctaacaaccac
atctctcgcatccagggcatggtggagcggctgtgccaggctctcgggaccccgctctgc
aaactggatcagaccacgtactacagttacccatccctgtctgcgctttcaggcagcagt
gtggaggcacggctcagggatctcgggtttggatacagagctcggttcctgcagcagagt
gcaaagcagatccaggacgcccacgggatgcagtggctggatggtctgcgcaccgttccg
tacgtgcaagctcgggaggcactgcgtaccctccctggtgtgggcaccaaggtggcagac
tgtgtatgtttgatgtccctggacaaagctgaggctgtccctgtagacacacacgtgtgg
cagattgccaaacgtgattacaactgtgcctttggaaaccaccagaagagcctcacagat
aaactccatcgagacatcggagactttttcagggcgctgtgggggtcatacgcaggatgg
gctcagtcagttttgttctgctccgacctcaagaagtttcaaaagctaaaagagacttca
catctcaagcagtcgtgtaaaatggaagacactgaagcagaaatgaggaaagagaaaaca
ataataaaaacagaataa
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