Tetraodon nigroviridis (spotted green pufferfish): GSTEN00033280G001
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Entry
GSTEN00033280G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K05722
FYVE, RhoGEF and PH domain containing 3
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
GSTEN00033280G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH
SOS1_NGEF_PH
FYVE
RHG20_PH
Ribosomal_L32p
HypA
PP1c_bdg
Motif
Other DBs
NCBI-ProteinID:
CAG11343
LinkDB
All DBs
Position
9
AA seq
725 aa
AA seq
DB search
MDAASGDSSCSQDAAAKVDGDPSPVEKLALATSDLADDVPDLSRLASVHIDDCAEEEIAH
GNGCLDIEPEDGSSHNLLDNRDSSDQNGKIPNRDSGIDSPSCTAEGEVFPNEDAIDEEDH
YDSVTETESVSCCVTLGHKRDSTQDEDSDLDEGSSGEIHSLTDTQTGYLTDAHSEAHKCS
EAQKLLNIARELLHTEEAYIKRLNLLDQVFCTKLTEAGIPQDVITGIFSNISSIYCFHDK
FLLPELKTRITGEWDSNPRIGDILQKLAPFMKMYGEYVKNFDRAMDLVNTWTQRSSQFKS
VVQNIQKQEVCGNLTLQHHMLEPVQRIPRYELLLKDYLKKLPEDALDRKDAEKALELIST
AANHSNAAIRKMEKMHKLLEVYERLGGEEDIVNPANELIKEGHIKKMSAKNGTAQDRYLY
LFNNMVLYCVPKLRLMGQKFSVRERIDIAGMEVQENVKQNLPHTFAIIGKQRSLELQART
AEEKEDWIQARIPHTCTDACSHVILATIERHKQNSETFNKAFNSSFSREEDHIPDSPGPW
GSTSADSDGEKLHERKSSRKKDKEKQTCKGCNESFNFTKRKHHCKSCGARQLSLTTENCL
LCGQLHVQEKGKTWTKMWAAVTRTEPLVLYLQSSGQDSKGARAVPLPGFEVSVIPPSSGE
KPEGKHGLRLSHTQQTLLLSAPDAEHQARWLELLSKAARGLETEWQFGACCTVCIVQCME
KKKDI
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgcatctggcgacagctcctgcagccaggacgccgctgccaaggtggacgga
gacccctcgcctgtggaaaaacttgcacttgccacctccgatctggccgacgatgtgccc
gatctttcccgtctggcgtctgtgcacatagacgactgcgccgaggaagagatcgcacac
ggcaacggttgcctggacatagagcccgaggacggttcctcccacaacctgttggacaat
cgggactcgtccgatcaaaacgggaagatccccaaccgagacagcggtatcgacagcccg
tcttgcaccgcagaaggggaggttttccccaatgaggacgccatagacgaagaggatcat
tacgacagcgtgacagaaacggagagtgtgtcctgttgtgtgaccctgggacacaagcgg
gactcgacgcaggatgaggacagtgacttggatgaaggaagcagcggggaaatacactct
ctgacagacacacagacgggatatctcacagatgcgcactcggaggcacataaatgttca
gaggcgcagaagctcctgaacatcgccagggagctgctccacacagaagaggcgtacatc
aagaggctaaacctcctcgaccaggtattttgcactaagctcacagaggctggaatccct
caggacgtcatcaccggcatcttctccaacatctcctccatctactgcttccatgacaag
ttcctgctgcctgagctgaaaacacgcattactggagaatgggactccaaccctcgtatc
ggagacatcctgcagaaactggctccgttcatgaagatgtacggtgaatacgtgaagaac
tttgaccgggccatggacctggtcaacacctggacgcagcggtcctcgcagttcaagagc
gttgtccaaaacatacagaaacaggaggtgtgcgggaacctgacgctccagcaccacatg
ctggagcccgttcagaggattcctcgctacgagctgctgctcaaggactacctgaagaag
ctgcctgaggatgctctcgaccgaaaagatgcagaaaaggctctggagctgatctccact
gcagcgaaccactccaacgcagcgatcaggaagatggaaaagatgcacaaactgctggag
gtttatgagcggctggggggagaggaggacatcgtcaacccagccaatgaactcatcaaa
gagggacacatcaaaaagatgtcggccaaaaatggaacagcacaagaccgatacctctac
ctgttcaacaacatggtgctatactgcgtgcctaaactgagactgatggggcagaagttc
agcgtcagagagaggattgacatcgctggcatggaggtgcaggagaacgtgaaacagaac
cttcctcacacgttcgccatcattggcaaacaacgttcactggagctacaagccaggaca
gctgaagaaaaagaagactggattcaggcaaggatcccacacacgtgcacagatgcatgc
tcacatgtgatcctggctactatcgaacggcacaagcagaacagcgaaacgttcaacaag
gctttcaacagctccttctccagggaggaagaccacatcccggactcaccgggtccctgg
ggcagcacctctgccgactcagatggcgagaaactgcatgaaaggaaaagctccaggaaa
aaggacaaagagaagcaaacctgcaaaggctgcaatgagagctttaacttcaccaagcgc
aagcatcactgcaagtcctgcggagcgaggcaactgtctctgacgacggagaattgtctc
ctctgtggccaacttcacgttcaggagaaaggaaagacctggaccaagatgtgggcggct
gtgaccaggacagagcctctggtgctgtacctgcagagcagtggacaggactccaaaggg
gcgcgggcggtacctctgcccgggttcgaggtgagcgtgatcccaccgtcgtcgggcgag
aagccagagggcaaacacgggctgcggctcagccacacccagcagactctgctcctaagt
gccccggatgcggaacatcaggccaggtggttggagctcctctccaaagcggcgcgcggg
ctggaaacagagtggcagtttggtgcgtgttgtacagtatgtatagtgcaatgtatggaa
aaaaaaaaagacatttaa
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