Tetraodon nigroviridis (spotted green pufferfish): GSTEN00033740G001
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Entry
GSTEN00033740G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04080
Neuroactive ligand-receptor interaction
tng04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
GSTEN00033740G001
04082 Neuroactive ligand signaling
GSTEN00033740G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tng04040
]
GSTEN00033740G001
Ion channels [BR:
tng04040
]
Ligand-gated channels
GABA-A
GSTEN00033740G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-ProteinID:
CAG11695
UniProt:
Q4RIT7
LinkDB
All DBs
Position
7
AA seq
246 aa
AA seq
DB search
QEYTMDVFFRQTWIDERLKFEGPIEILRLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNK
LFRIMQNGTILYTMRLTINAECPMRLMNFPMDGHACPLKFGSYAYPISEIVYTWKKGPLS
SVEVPQESSSLLQYDLIGQTVSSERLKSNTGEYVIMTVHFHLQRKMGFFLIQTYIPCIMT
AITTFLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRE
LRKAAA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
caggaatacaccatggacgtgttcttccgccagacgtggattgacgagcggctaaagttc
gaaggtccgatcgagatcctgcggctcaacaacctgatggtcagcaagatctggacgccc
gacacctttttccgcaatggcaagaggtcgatttctcacaacatgaccacccccaacaag
ctgttccgcatcatgcagaacggaaccatcctctacaccatgagattaactataaatgcc
gagtgtcccatgcgtctgatgaacttcccgatggatggccatgcctgtccgctcaagttt
gggagctatgcttaccccatcagtgagatcgtgtacacctggaagaaagggcccctgtcc
tccgtggaggtgcctcaggagtcctccagcttgctgcagtacgacctcattggtcagacg
gtatccagcgagagactaaagtccaacacaggtgaatatgtcatcatgacggtccacttc
cacctgcagaggaaaatgggcttcttcctcattcagacttacattccctgtatcatgacg
gcaatcaccacgttcttgaccatgacaactcttagtatcagtgcccgccactccctgccc
aaagtttcttacgccacagccatggattggttcatcgcagtctgctttgctttcgtcttt
tccgccctgatcgagtttgcggccgtaaactacttctccaccctgcaagccaaccgggag
ctaaggaaggcggccgca
DBGET
integrated database retrieval system
