Tetraodon nigroviridis (spotted green pufferfish): GSTEN00033985G001
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Entry
GSTEN00033985G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K08532
RAR-related orphan receptor alpha
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00033985G001
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tng03310
]
GSTEN00033985G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
GSTEN00033985G001
Nuclear receptors [BR:
tng03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
GSTEN00033985G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
TPR_IFT122
VPS13_M
TFIIA
DUF2721
Spt20_SEP
Hydin_ADK
Motif
Other DBs
NCBI-ProteinID:
CAG11892
UniProt:
Q4RI90
LinkDB
All DBs
Position
8
AA seq
503 aa
AA seq
DB search
AQIEVIPCKICGDKSSGVHYGVITCEGCKGFFRRSQLPTVSYSCSRQSNCQIDRASRNRC
QHCRLQKCLAQGMSRDGESRAAADPTFPWLLPGTSPLLSSTAVKFGRMSKRQRDSLIAEV
ERHRQQQQQQQQQQQQQQQLQQLQEGTPSLLSYPAKTRQDRATQLLQPAYSFTGENELMP
YAADVHPYLFCSPNESQVSNMIYRGTGVSPVSRSQGRGDSGGHPDVRGFESRQPSHVLVA
SFPYNPLENRYTFYPHSLRNTALCLLDELCASIVRAHRETSQWRVEELQGLRWKLFSREE
IQAYQSKSVDEMWQHCAIRLTDAVQYVVEFAKHIPGFRMLTQNDQIALLKTGSMEVVLVR
MSRFFNTENNTVYFDGKFAGADLFKSLACGDLITAVFDFAHDMCALKLSEHQLALFSALV
LINTDRPCLEDRGKVQRVQRTVELGLRHILQKDNQEGLMAKLYQKMAVLRSLCSLHMEKL
RWFSQRYPLTVHSLFPPLYKELF
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
gcccaaatcgaagttatcccctgcaagatctgtggcgataagtcctccggagtgcactat
ggcgtcatcacctgcgaaggttgtaaggggtttttccgccggagccagctgcccaccgtg
tcctactcctgctccagacagagcaactgtcagatcgaccgggccagccgcaaccgctgc
cagcactgccgcctgcagaagtgcttggcccagggcatgagcagagacggtgagagtcgc
gcagcagccgaccccacgttcccctggctgcttcctgggacatcacctctgctgtcctcc
acagccgtcaagtttgggcggatgtccaaacgccagcgggactctttgattgctgaagtg
gagagacaccgtcagcagcagcagcaacagcagcaacagcagcagcagcagcagcagctg
cagcagctgcaggaagggacgccgtctctcctgtcctacccagccaagacgcgtcaggat
cgcgccacacagctgctccaacccgcctactccttcacaggggagaacgagctgatgccc
tacgccgctgacgtccacccttacctcttctgctcccccaatgagtcgcaggtgtcaaat
atgatctaccgaggcaccggagtctctccggtgtcacgatcccaaggaagaggggacagc
ggtggacaccctgacgtgagaggattcgagtccagacagccgtctcatgtcctcgtggcc
agttttccctacaaccctctggagaatcggtacaccttctatcctcactccctgagaaac
acggcactctgccttttagatgagctgtgcgccagcatcgtgcgtgctcacagagagacc
agccagtggagggtggaggagctgcagggtctcaggtggaaactgttcagcagagaggag
atccaggcctatcagagcaaatcggtggacgagatgtggcagcactgcgccatccgactg
actgatgccgtgcagtacgtggttgagtttgcaaagcacatcccaggcttccgtatgctg
actcagaacgaccagatcgctctcctgaagaccggctccatggaggtggttctggtccga
atgagccgcttcttcaacacagagaacaacaccgtctactttgatgggaaatttgctgga
gccgacctgtttaagtctttagcctgtggcgatttgatcacagcggtgtttgactttgct
cacgacatgtgcgcgctgaagctctctgagcaccagctcgccctcttcagcgctctggtg
ctgatcaacacagatcgaccatgtttggaggaccgaggcaaggtgcagcgagtacaaagg
acggtggagctgggcctcagacacattcttcaaaaagacaaccaagagggtctaatggcc
aagctgtaccagaagatggcggtgctacgttccctgtgcagcctgcacatggagaagctg
cgctggttcagtcagcgctacccgctcacggttcactctctgttccctccgctctacaaa
gagctgttc
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