Tetraodon nigroviridis (spotted green pufferfish): GSTEN00033989G001
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Entry
GSTEN00033989G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10867
nibrin
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03440
Homologous recombination
tng04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GSTEN00033989G001
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
GSTEN00033989G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tng03032
]
GSTEN00033989G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00033989G001
DNA replication proteins [BR:
tng03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
GSTEN00033989G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
GSTEN00033989G001
BRCA1-C complex
GSTEN00033989G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nbs1_C
FHA
NIBRIN_BRCT_II
Yop-YscD_cpl
BRCT
PTCB-BRCT
MU2_FHA
Motif
Other DBs
NCBI-ProteinID:
CAG11895
UniProt:
Q4RI87
LinkDB
All DBs
Position
8
AA seq
570 aa
AA seq
DB search
GQTHYLPPGKEYVVGRKNCDVLLTSDQSISRAHAQLVPNNQGMTLKDSSKYGTFVNSQRL
TGNTAVDLKSGDSVTFGVFESKFIVEHLKPVVCSSCLDPNGKAVLSQSLAALGGELVNSW
SLECTHLVMTSVKVTVKLKRLSAAVGFGGGRSLLLEEGSLPRQLLECPQSCLIDVTTGSS
QALAPSSTTEWAKAVKNVVQRKGLRVIPESEIGLAAIYASCDRHCNPSHHIADSGHNKAK
FVVAWWWEKLPRRGRSRAPVSSTPPLPEFRDRPHVQSWTIGERSQQRRQADRRSSLRPDW
KEELNNRKRKEMEEDIEMDELESIMSLDMDFFDELPAESHQAQTSTQSSHEKKHSVDTAE
ASSASKRPRLHFEDGPGGKLKCDVKKESHSEQPGWPAVSIKTEEPHLSEHGSTYGEASKR
PQTSSSTTHTNTKAFEDDEDLQRPAADIFQPEEETKIPMKAVTIKQEVQAEIDENLPKQL
VVVEYRSLTVAEGPKEKPQKVPDASCKKNFKSFRKHSVPGMRGSPDVIAGADLLVHNRGR
NSDLDEWLKDAIEEERQSRRDENVGDDLFR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
ggtcagacccactatctcccccctggtaaggagtacgtggtgggtcggaaaaactgcgac
gttcttctgaccagtgaccagtccatcagcagggctcatgctcaactggtgcccaacaac
caaggaatgaccctgaaggacagctccaagtacgggaccttcgttaacagccagcgcttg
actgggaacacagcggtggacctgaagtcaggcgacagcgtcacatttggggtgtttgaa
agcaaattcattgtggaacatctgaagccggtggtgtgttcatcttgtctggaccccaat
gggaaggcggtgctgtcccagtctctggctgctttgggtggagagctggtaaacagctgg
tctctggagtgcactcacctggtgatgacctctgttaaagtcactgtgaagctgaagcgc
ctgagtgcggcggtgggtttcgggggtggcaggagcctgctgctggaggagggctctctg
cctcgccagctgctggagtgtccgcagagctgcctgattgacgtgacgaccggcagctct
caggctctggcgccttcctctaccaccgagtgggcaaaagctgtgaagaatgtcgtccaa
agaaaaggcctgcgtgtcatcccagagtccgaaatcggattagccgccatttatgcctcc
tgtgatcggcactgcaatccgtcccaccacatagcagactcgggacacaacaaagcaaag
tttgtggtggcatggtggtgggagaaactcccgagaagaggcagaagcagagcaccagtc
agctccacgccgccgttaccagagttcagagaccggccacacgtccaatcatggacgatc
ggagagcgctcacagcagagaaggcaggcggacagaagaagcagcctgaggccagattgg
aaggaggagctaaacaacagaaagaggaaggaaatggaagaagacatcgagatggacgag
ctggagtccatcatgtctttggatatggacttcttcgacgagctccctgctgaaagccac
caagcccaaacgtcaacgcagagctcgcacgaaaagaaacacagcgtggatacggcggag
gcatcatctgccagtaaaagaccgcgtttgcactttgaagatggaccaggcggaaaacta
aagtgtgacgttaagaaagagagccacagcgagcaaccagggtggcctgcagtctccatc
aagaccgaagagcctcatctttcagagcacggctcgacttacggggaagccagcaaacgt
ccacaaacgtcctcctctaccacacatactaacacgaaggccttcgaagacgacgaggat
ttacagcgacccgcagcagatattttccagcctgaggaggagaccaagattcccatgaaa
gcagtcactatcaagcaggaagtccaggcagagattgacgagaaccttcctaaacagctg
gtggttgtggagtatcggtctctgactgtggccgagggtcctaaagagaaaccccaaaag
gtgccggacgccagctgcaagaagaactttaaatctttccgcaagcactctgtcccgggt
atgagaggctcgcctgacgtcatcgctggcgccgatctgctggtccacaacaggggaagg
aactccgacctggacgagtggctgaaagatgccatcgaggaggagcgccagagcagacga
gacgagaatgtaggagacgacctgtttaggtaa
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integrated database retrieval system
