Tetraodon nigroviridis (spotted green pufferfish): GSTEN00034030G001
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Entry
GSTEN00034030G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K14827
pre-rRNA-processing protein IPI1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
GSTEN00034030G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tng03009
]
GSTEN00034030G001
Ribosome biogenesis [BR:
tng03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
GSTEN00034030G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
HEAT_GCN1
HEAT_EF3_N
MMS19_C
HEAT_MROH2B_C
Adaptin_N
HEAT_GCN1_C
TOR1L1_N
HEAT_EZ
DUF2474
Motif
Other DBs
NCBI-ProteinID:
CAG11931
UniProt:
Q4RI51
LinkDB
All DBs
Position
8
AA seq
938 aa
AA seq
DB search
MKSKKKKRQDDFQKVKLKVGKTKPKANNATNTNFRTKGIYLSEQLKKDTSGPTTHRQLGI
NDLLSQLHHYNDNVKNSALLGLRELLTLNPSLLEEHLSRLLSEVAAVFTDKDGSVRSATT
RLLKFIAQSVPAERVAPFFPLLSAHLSCAMTHIDTGIQEDSIKILDVLLEHYPALLAARP
EVLLTNFLELISHRQNSGGNKKVQEPKGRTWALSINPSRAVTSQQWRLSVLLRLGRFLQA
VVEERPVEESDIFVPAEGVFGSRGEGKLTPLHLTWEELAFRKTGVRVYEHSGGKPTPRSS
FTLRYDPTLRPVADSGPALGQCLDSAEAVQSFAATLVPLLLEVWVEASTSDSAQSSSEGT
HLLTPDAMSVMFQVLSILQLLRKLAPTLGHRDALDAWFHKEYLEDFKQHFMKNFPYSILD
TPKYKKKVDLKRGKQTAVSPGLTVEPLALNITLCQVMVSLSQGQGLCRETDGDWLSPVKI
FVRDTLGSGVKLNYRHLHMLLGTVWKMVLSQRSKAVTEDLLAAVYVYYRQKHLTLQARSL
LLSFYSKLYLQEQGHTHIARSKVLCRWLASLPVQLTQLGHRNPALSAQMITSIQTAASRG
HKDLLTSLQTCACTIYDAQEGVLVLLPAESQQRLVQLLYFLPQMPQPLLVQLSCCCTAGR
ITATLATSLIRIVHLRSSLSGWAGGPQEAAVQDVDYVSFLFSTMTGFSSDKLASLQELRD
DYVLPPSSVTPLSLYCTHLDQFTHHWDVVEEVCRCLEALGSKPHCFDIVQNGICKYLNKL
RVVPDNMAAGLLKAVSRLVEPSVPPTEPTLRFLSHCCFSLLAQLVTLQQPPEETNHKRCV
WTLLGLPDLCSLGLKRVCSSRDAIWGACVSALSAVPRLLRTLLQLMQGKDLRDAELPQLG
QILSMLLSSCSSKQHMPLHSQLTASSALLQDIIQHLTV
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaagaagaagaagagacaggatgatttccagaaggtgaagttaaaggttgga
aagaccaagcccaaagccaacaatgccaccaataccaattttcgcacaaaggggatctat
ctgtctgaacagttaaaaaaagatactagtggccccaccacgcacaggcagctcggtatt
aatgatctcctatcacagctccatcactacaatgataatgttaaaaatagtgccttactc
gggttacgggagttgctgacgctgaacccctctctgctggaggaacatctgtcccgtctg
ctttctgaggtggcagccgttttcaccgacaaagacggcagcgttcgatcagcaaccacg
cgtcttctgaagttcatcgcacagtctgtgcctgcggaacgggtggctccgtttttccct
ctgctcagtgcccacttgtcttgcgcgatgacccacatcgacacgggcatccaggaggac
tccataaagattctggacgtgttgctggagcactaccccgctcttctggccgcacggccc
gaagtgctcctcactaacttcctggagttaatctcgcacagacaaaacagtggaggaaat
aaaaaagtgcaggagcctaagggacgcacctgggccctgtcgatcaatcccagcagggcg
gtgacgagccagcagtggcggctgtctgtgctactacggcttggacgtttcctgcaggcc
gtggtggaggagagaccagttgaggaaagtgatatttttgtcccagccgagggagtgttt
ggctccagaggcgagggtaagctcacacctctgcatctcacctgggaagagctagccttc
aggaagactggagttagagtgtatgaacattctggaggcaaacccaccccacgttccagc
ttcacgctcaggtacgaccccactctcaggcctgtggcagactcgggaccagccctggga
cagtgtttggactcggcggaagctgttcagagcttcgccgccactctggtgccgctgctg
ctggaagtctgggtggaagccagcacaagtgacagtgcgcagagtagcagcgaaggcaca
cacctgctcacgccagatgccatgtccgtaatgttccaggtgttgtccatcctgcagttg
ctcagaaagctggctccaaccctgggtcaccgggatgccttggatgcctggtttcataag
gaatacctggaagattttaagcagcacttcatgaagaactttccctacagtattctggac
acgcccaagtataaaaagaaggttgatctcaaaagagggaagcagacggcagtcagccca
ggactgacggtggaaccgctggctctcaacatcacgctctgtcaggtcatggtgtcgctc
agccaggggcagggactctgccgggagacggatggagactggttgagccccgtgaagata
tttgtccgagacactctgggcagcggagtgaaactgaattacaggcatctccacatgctg
ctgggaactgtgtggaaaatggtgctttcccagaggagcaaggcggtgacagaggacctg
ctggcggccgtctacgtctactacaggcagaaacacctgacgctccaggcccggtctctg
ctgctgtccttctacagcaagctttaccttcaggagcagggacatacacacatagcgagg
agtaaagtgctgtgtcgttggttggcgtctctccctgtgcagctgacccagctgggccac
cgtaacccagccctctctgcacagatgatcacgtccatccagactgctgcttctagagga
cacaaggacctgctcaccagtttgcagacgtgcgcctgcacaatctatgatgcgcaggag
ggcgtactggtgctgttaccagccgagtcccaacagcgactggtgcagctgctctacttc
ctaccccagatgccccagcctctgctggtccagctgagctgctgctgcacggccgggcga
atcaccgccactctcgccacctccttgattcgtattgtgcaccttaggtcgtctctgagc
ggctgggcgggaggaccccaggaagcggccgtgcaggacgtggactacgttagcttcctg
ttctccaccatgacggggttctcctcggacaagctggcctccctgcaggagctccgagac
gactacgtcctgcccccctcctccgtcacgcccctcagcctctactgcacccacctggat
cagttcacacaccactgggatgttgtggaggaggtctgccgctgtctggaggctctgggt
tccaagccccactgcttcgacattgtgcaaaacggcatctgcaaatatctgaacaagcta
agggtggtgcctgacaacatggcggccgggctgctgaaagcagtttccagattagtcgaa
ccgtcagtcccgcccacggagcccacgttacgcttcctgtcccactgctgcttctccctg
ctggctcagctcgtcaccctccagcagccgcctgaggaaaccaaccacaaaaggtgtgtg
tggacactccttggcctccctgacctctgctctctgggattaaaacgcgtttgttcttct
agagacgcaatatggggagcctgcgtgtcggcgctgagcgccgtccctcgcctgctccgc
acgctgctgcagctgatgcagggtaaagatctaagggacgcggagctgccccagctcggg
cagatcctgtcgatgttgcttagcagctgttccagcaagcagcacatgccgcttcacagc
cagctgacggccagctccgccctgctacaagacatcatccagcacctcacggta
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