Tetraodon nigroviridis (spotted green pufferfish): GSTEN00034070G001
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Entry
GSTEN00034070G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06584
integrin alpha 8
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04510
Focal adhesion
tng04512
ECM-receptor interaction
tng04514
Cell adhesion molecule (CAM) interaction
tng04810
Regulation of actin cytoskeleton
tng04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
GSTEN00034070G001
04514 Cell adhesion molecule (CAM) interaction
GSTEN00034070G001
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
GSTEN00034070G001
09142 Cell motility
04820 Cytoskeleton in muscle cells
GSTEN00034070G001
04810 Regulation of actin cytoskeleton
GSTEN00034070G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00034070G001
Cell adhesion molecules [BR:
tng04515
]
Integrins
Integrin alpha subunits
GSTEN00034070G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-ProteinID:
CAG11957
UniProt:
Q4RI25
LinkDB
All DBs
Position
8
AA seq
1115 aa
AA seq
DB search
FNIYAEHPTLYRGPDGSYFGYSVDFYQASTDRNTVSVLVGAPKANTSQPGIVEAGAVYYC
PWPGPPDSCRQIPFDNSNNRMIKMNGTREPLEFKSHQWFGASVRTHKGKVVACAPLYHWR
TVKLSGEKDPVGTCYVAVQNFSAYAEYSPCRTNDPDPEGQGFCQAGFSVDFTKEGTLVVG
GPGSFYWQAEKLKRVQRCRRSERVSEFKLSTCNNTPPAPGQVMTAGIAEILNGYSLKAVL
RQVPGEKHTRAAEDTHDDSYLAACFKLYSELLQFYCFPCVGYSVAVGEFTGDSEQELIAG
VPRGAQNFGYVAMINSTNMTFIQNFSGEQVGLATFPSHHPSHLDSCIICHVFQMASYFGY
SLTVTDLNGDGTDDVLVGAPLYMEREMESYPREVGRVYLYLQLSPLTFSDPVLLTGTYTF
LRARNSDSTSGRPQPGWIQWKSCQKLLLEIMLSSSADVAVGCPFGGEEHGGRVLIYNGHQ
DVAAQGLMLSQELRAARSRAGALSGYGFTLRGGHDLDKNQYPDLIVGAFGSGEVSVYRSR
AVVSAEASMNLTPRVLNPDDRQCHLPQTDIMATCLKVDVCATVSGVGIPASLDLRAELQL
DWLKGARGGVRRVLFLDTQEPQRTMLLRLGHRHPRACLTHTIYLKEDDEFRDKLTPISLA
LNYSLAPPSRGQDLPPILNHYSSTFLQEQAYILLDCGDDNVCIPDLQLSAIMDRSELLIG
DDNPLLLTITAVNRGEGAYEAELHALIPPEADYIGVKRSAETLSEPDCEYKTVNDSRMVV
CDLGNPMVAGTELTVGLRFSVQRLEDVGPVIGFSMQIHSSNKDNPQSNPVSLNLTIAAVA
QLDLRGVSHPSQVVLPFPRWEPKEKPVKEDEVGPQVTHIYELHNFGPGSIQEAELHVGWP
SRFRERNLLYAMEIQTDGPISCKTNNSLNPLGLQVSSVQDTPELLGFLRNTSASHQRHRR
AVSGSQGSVGKTLNCTNVSCLRIACLIGRLDRRQSAVVKIRSRLWVQTFLQHRNSPYILN
STVSFEVRSMPYRVQPALLPKHTTSMGTLVLWGTPDVSFAVPLWVIILAILLGLLVLAIL
TLAMWKCGFFDRAKPPSDDNVSDQEQLTADQTADA
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
tttaacatttacgcggagcatcccacgctttacaggggaccagatggaagttatttcggt
tattctgtggacttttatcaagcttctaccgacagaaacacggtcagtgtgttggtgggg
gctcccaaggcgaacacctcccaaccaggcatcgtggaggctggtgccgtgtattactgc
ccctggcccggtccccctgacagctgcaggcagataccctttgacaactcgaataacaga
atgataaagatgaatggcaccagggagcctctggagttcaagtcgcaccagtggttcggg
gcgtcggtcaggacgcacaaaggaaaagtggtggcctgcgctcctctctaccactggcgg
acagtgaagctaagcggggaaaaggacccggtggggacctgttacgtggctgtccagaac
ttcagcgcctatgccgagtactcgccctgcaggaccaatgacccagacccagagggacag
ggcttctgccaggctggtttcagtgtggatttcactaaggaaggaacactggtggtagga
ggccctggaagcttctactggcaagcggagaagctcaagcgtgttcaaaggtgtcgacgc
agcgagagagtgtcagagttcaagctgtcgacgtgcaacaatactcccccagcgccaggt
caggtgatgacggcgggaatagccgagattctgaacggctactccttgaaagcggtgctg
agacaagttccaggagagaaacacactcgggcggctgaggacacacatgacgacagttac
ctcgctgcctgttttaaactctactctgagctgctgcagttctactgttttccttgtgta
ggttactctgtggccgtgggggagtttacaggagactcagaacaagaactgatagctgga
gtcccacgtggagcacagaactttggatacgtggcaatgatcaattccaccaacatgacc
ttcatccagaacttctcaggggaacaggtaggattagccacatttcccagtcaccaccca
tcccacttagattcttgtataatatgccatgtctttcagatggcctcctactttggttac
tctctgactgtcactgacctaaatggagatgggactgatgatgttctggtgggtgcccct
ctctacatggagagagaaatggagagctatcccagagaagtgggcagggtctacctctac
ctgcagctctccccactcaccttctccgatcctgttctgctgacgggcacatacaccttc
cttcgcgctcggaacagcgatagcacctctgggcgacctcaaccaggatggatacaatgg
aaatcctgtcagaagctgctgctcgaaataatgttaagctcttcagccgatgtggcagtt
ggctgcccgttcggaggagaggagcatggaggaagagtactgatatataacggtcaccaa
gatgtagccgcacagggcctgatgctgagccaggagctgagagcagcccgaagccgagcc
ggggctctttctggatatgggttcacgctgcgaggaggccacgacttggacaaaaatcag
tatcctgatttaatcgtgggggcgttcggctcaggagaggtctccgtctacaggtctcgg
gctgtggtttctgcagaagcctccatgaacctgactcccagagttctgaaccctgatgac
cgacagtgtcatctgcctcagacagacatcatggcgacctgcctaaaggtggacgtgtgt
gcaaccgtgagcggagtggggatccccgcctctctagatctgagggcagaactgcagctg
gactggctgaaaggagcaaggggcggagttaggagagttctgttcctggacacgcaggag
cctcagcgcaccatgctcctacgactcggtcacagacacccacgtgcatgtctgactcac
accatttacctgaaagaggatgatgagttcagggacaaactgacccctatctcactggca
ctgaactacagcttggctccgccttctcgcggccaggacctcccacccatcctcaaccat
tacagcagcaccttcctccaggaacaagcctacatcctcctcgactgcggcgacgacaac
gtttgcatccccgacctccagctctcggccatcatggaccgctcggagctgctgattgga
gacgataacccgctcctgttgaccatcaccgcggtgaaccgaggagagggggcctatgag
gcagagctgcacgcactgatccctccagaggccgactacatcggcgtgaagcgcagcgca
gagactctctctgagccggactgtgaatacaagacagtcaatgactccaggatggtggtg
tgtgacctcgggaacccaatggtggccggtacggagctgactgtcggtttgaggttttcc
gtccagcggctggaagacgtcgggccagtaatcggcttctcgatgcagatccacagctcc
aacaaagacaaccctcagagcaaccccgtcagcttgaacctgaccatcgccgccgtggcc
cagctggatttacgtggggtgtctcacccctctcaggtggtgctgccgttccctcgctgg
gagcccaaagagaaacccgtcaaagaggacgaagtggggccacaagtgacgcacatctat
gagctccacaactttgggcccggcagcattcaagaggctgagcttcacgtgggctggccg
tcccgtttccgtgagcggaacctgctgtacgccatggagattcaaaccgacggccccatt
agctgcaagacaaacaacagcctcaacccgctcggcctccaggtttcctccgtccaggac
acgccggagctcctgggctttctgaggaacaccagcgcgtctcatcagcgccacagacgg
gccgtctccggctctcagggctctgtcggtaaaactctgaattgcaccaacgtctcctgt
ctgaggatcgcctgtctgatcggccggctggatcggcgtcagagtgccgtagtgaaaatc
cgctccagactctgggtgcaaacgttcctgcagcaccgtaacagcccctacattctcaac
tccaccgtgtccttcgaggtccgatccatgccttaccgcgtccagcccgctcttctgccc
aaacacaccacctcgatggggaccctcgtgctgtgggggactccagatgtgtcgttcgcg
gtgccactctgggttatcatcctggccatcctgctggggctgctggtgctcgccattcta
acgttagccatgtggaagtgcgggttctttgaccgggcaaagccaccaagtgacgacaac
gtttcggaccaggagcagctgactgctgatcagacggccgacgcatag
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