Tetraodon nigroviridis (spotted green pufferfish): GSTEN00034213G001
Help
Entry
GSTEN00034213G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K14791
periodic tryptophan protein 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tng03009
]
GSTEN00034213G001
Ribosome biogenesis [BR:
tng03009
]
Eukaryotic type
90S particles
Other 90S particles
GSTEN00034213G001
Pre-60S particles
Other pre-60S particles
GSTEN00034213G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40
WD40_RFWD3
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_EIPR1
WD_LRWD1
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-ProteinID:
CAG12071
UniProt:
Q4RHR1
LinkDB
All DBs
Position
19
AA seq
550 aa
AA seq
DB search
LEMSCQITCVSWVSRGVAKETPDKVELNPEELQRIIAEAKDELGERAAGDEEEEDEGIEA
EPHPSSHSGDVAAGDSQRQKAEDDGLAEYELDRYDEDTVTANLGDSLAGLTVFSSNEEDP
YITLKDTDQYEREDFQIKPSDNLILTGRAEKDCCNLEIYGNGLLFGLYIIGCIRKSWIYI
KAVTNINVLIFLSTVYNSEEESMYVHHDILLPAYPLCVEWLNFDPHPGEGPANYAAVGSM
TPQIDVWDLDVVDCLEPVFTLGSKKATKKKKKSKKGAAAEPTEGHTDAVLDLSWNRLVRN
VLASGSADEAVVLWDLSQGKAATTLRKHTDKVQTLAFHPFEAQTLISGSYDKTAILYDCR
SPDSSYRTWRFSGQVERLVWNHFSPCNFLASTEDGFVYCLDARSDKPVFTLRAHDEEVSG
QQKCIFMPVRVGKRKEDLSSSEIIRGHNKTMFSPGLELSSQIKGCLVTASADKHVKIWDV
LNNKPTLVHSRDMKMGVLFCAACSPDLPFVYAFGGQKEGLRVWDISDVAAVSAVFGDRER
LVATSGSQGS
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
ttagaaatgagctgccagattacctgtgtgtcgtgggtgagcagaggtgttgccaaggag
acgccggacaaagttgagttgaacccagaagagttacagcgaatcattgcggaggccaag
gacgagctgggagaacgggcagccggtgatgaagaggaggaggatgagggaatcgaagct
gaacctcatccaagcagccactcaggagatgttgctgcaggtgacagccagcgacaaaag
gctgaagacgatggcctggcagagtatgagctggacagatacgacgaggacacagtgaca
gccaacctcggcgacagtctcgctggtctcacagtcttcagctctaatgaggaggatccg
tacatcaccctcaaagacacagaccagtatgagcgagaggacttccagatcaagcccagc
gacaacctcatcctcaccggccgggcagagaaagactgttgcaatttggaaatctatggt
aacggccttctgtttggactttatattataggatgtatacgaaaatcatggatttatatc
aaagcagtcacaaacataaatgtacttatatttctgtccacagtttacaactctgaagaa
gagtccatgtatgtccatcatgatattctgctgccggcgtaccctctgtgtgtggagtgg
ctgaactttgatccacaccctggagagggtcccgctaattacgctgccgtcggcagcatg
actccccagatcgacgtgtgggacctggatgtggtcgactgtttggagcccgttttcaca
ctggggagcaaaaaggccaccaaaaagaagaagaagagcaaaaagggggctgcagcagag
cccaccgagggacacactgacgccgtgctggatttatcctggaacagactggtccggaac
gtgttggccagcgggtcggcagatgaggccgtcgtgctgtgggatctctctcaaggcaaa
gcggccaccaccctgagaaaacacaccgacaaagttcagactctagctttccaccctttc
gaggcacagactttgatttccggatcgtacgacaagacggcaatcctgtatgactgccgg
agcccagacagcagctatcggacctggaggttcagtggccaggtggaacgcctggtctgg
aaccatttttcaccctgcaacttcttggccagcacagaggacggctttgtctactgtctg
gacgctcgctctgataaacctgttttcacactgagggctcatgatgaagaagtctcaggt
cagcaaaagtgtatttttatgcctgtgagagttggtaagagaaaagaagacttgtcctcc
agtgagattattcgtggtcataataaaaccatgttttctccagggctggagctcagcagt
cagattaaagggtgcctcgtcactgcgtcggctgataaacatgtcaaaatttgggacgtt
ctgaacaacaaacccaccctggtgcattccagggacatgaaaatgggtgttttgttctgt
gccgcgtgcagccctgacctgcccttcgtttacgcctttggaggacagaaagaaggcctg
agggtttgggatatcagcgacgttgcagcagtgtccgcggtgtttggtgatcgggagcgt
ttggtggcgacctcaggatcacaggggtcc
DBGET
integrated database retrieval system
