Tetraodon nigroviridis (spotted green pufferfish): GSTEN00034367G001
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Entry
GSTEN00034367G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K09371
LIM homeobox transcription factor 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00034367G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
GSTEN00034367G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
LIM
Homeobox_KN
Med3
UPF0697
Motif
Other DBs
NCBI-ProteinID:
CAG12173
UniProt:
Q4RHF9
LinkDB
All DBs
Position
3
AA seq
318 aa
AA seq
DB search
FYKGISIFCAHRLFVRKCSSCLQVIGRSELIMRVQGQVYHLGCFTCCECERRLQRGDEFV
LKEGQLLCRMDYEKEREMLAAISPTPTESVKSEDEDGGVGSGGGKGVDDGKEHKRSKRPR
TILTTQQRRAFKASFEVSAKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKKIARRQQQ
QQQQQQQEQEQLGGTRRGPSRGGRQNGSSTHGMDGMLGYPSLPRQQLLALDPNIYGGEPF
RHGLTPPQLNNEQIHSYAVNTHLFTTDSETVFHDLDSDGSLGHLGDCLLATGEGNLLPGR
VGNPIDRLYSMQNSYFTS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
ttttataagggaatttctattttttgtgcacacaggctgtttgtaagaaaatgcagctcc
tgcctgcaggtgattggacgctcagagctgataatgcgcgtgcagggccaggtgtaccac
ctcggctgcttcacttgctgtgagtgtgaacgccgtctgcaaagaggtgatgagtttgtg
ttgaaggaaggccagctgctctgccgcatggattatgagaaagagagggaaatgttggct
gccattagtcccacaccaactgaatcagtgaaaagtgaggatgaggatggtggagtcggc
tccggtggaggaaagggtgttgatgacggtaaagagcacaagcgttcgaaacggcctcga
actatcctgaccacacagcagcgccgtgctttcaaggcctcctttgaagtgtctgctaag
ccgtgccgcaaggtgagagaaacactggcggctgagactggactgacagtgcgcgttgtg
caggtgtggtttcagaaccagagagccaagatgaaaaagatagctcggagacagcagcaa
cagcagcagcagcagcagcaggaacaagagcagctcggaggaacaaggagaggaccgagc
agaggcggccgccagaatggctccagtacccatggcatggacgggatgctggggtatccc
tctttgccccgtcagcagctgcttgctctggaccccaacatctacggtggagagccgttt
cgacatggactgacaccaccgcagctgaacaacgagcagattcactcctatgctgtaaac
actcatttatttactacagactcagaaacggtgtttcacgacctggacagtgatggcagc
cttggtcaccttggagactgcctcttggcaaccggggagggaaacctgcttccagggcga
gtggggaatcccatcgaccgtctctattccatgcaaaactcctacttcacctcctga
DBGET
integrated database retrieval system
