Tetraodon nigroviridis (spotted green pufferfish): GSTEN00034406G001
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Entry
GSTEN00034406G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04120
Ubiquitin mediated proteolysis
tng04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GSTEN00034406G001
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
GSTEN00034406G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00034406G001
Enzymes [BR:
tng01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
GSTEN00034406G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
GSTEN00034406G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-ProteinID:
CAG12208
UniProt:
Q4RHC4
LinkDB
All DBs
Position
3
AA seq
496 aa
AA seq
DB search
KRKMGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGEN
MDLNFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDTPVEDGGKPKVQ
YGVEFTFDADARVAITLYCQAFEEFSNGMAVYSPKNPSLVSETVHYKRGVSQQFSMPSFK
IDFSEWKEEDVSLFLVFDDTPVVVLCVTLLNLSFSLKLNFDLDRGVFPMVIQAVVDEGDG
GSQEQICSNTLESFNCLGHAHVLLAAFERHVDGSFSVKPLKQKQIVDRVSYLLQEIYGIE
NKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCNSCADTLRYQANNCPICR
LPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDEHSSTDSVPPGFEPISLLEALNGFR
SVSPAIPSAPLYDEINFSGGLGGDGRQLSSPEHLSDSSLQKGKVSKSPDSTLRSPSSPIQ
EEDEEKLSEMSDAQPP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
aagagaaagatggggtccatcctgagtcgcagaatcgctggtgtcgaagatatcgacatt
caggctaattcagcctatcgattcccaccgaaatcggggaattattttgccagccatttt
ttcatggggggagagaagtttgacacgccacatccagagggatacctctttggagaaaac
atggaccttaatttcctcgggaaccggccagtgcagtttccatacgtgactcctgcgccc
cacgagcctgtgaagactctgaggagtctggtcaacattagaaaagactctctgcgcctg
gtcaggtataaagatgactctgacacacccgtggaggatggagggaagccaaaggttcag
tatggtgtggagttcacctttgacgccgacgctcgagtggccatcaccctctactgtcag
gcattcgaggagttctccaacggcatggcagtgtacagcccaaagaacccatcgctggtc
tcggagaccgtgcattacaagcggggggtgagccagcagttctccatgccctctttcaaa
atcgatttcagcgagtggaaagaagaagacgtgagcctcttccttgtttttgacgataca
cctgtcgtcgttctgtgtgtcacgttattaaacctgtccttttctttaaagctaaacttt
gacctcgatcggggggtgttccccatggtgatccaggccgtggttgacgagggagacggt
gggtcacaggagcagatctgctccaacacgctcgagagcttcaactgcctcggacacgct
catgtgcttttggcggcctttgaaagacacgtggatggcagcttctccgtcaagcctctg
aaacagaaacaaatcgtggaccgcgtgagctacctcttacaggagatttatgggatcgag
aacaaaaacaaccaggaaaccaagccgtcagatgatgagaacagcgacaacagcagcgag
tgtgttgtgtgtttatcggacctgcgagacacgctcatcctgccctgcagacacctgtgt
ctctgcaactcctgcgcagacacgctgcgttaccaggccaacaactgtcccatctgcagg
ctgcccttcagggccttgcttcagatccgagcggtgaggaagaagcctggtgctctctcc
cccgtgtctttcagcccggttctggctcagactatggaccacgacgagcactccagcacc
gactcggttcctccgggattcgaacccatctctctgctggaagctctgaacggtttccgc
tcggtgtccccggccatcccgtcggctcctctgtacgacgaaatcaacttctcgggcggt
ctgggaggcgacggccgacagctgagctccccggaacatctgagcgacagtagtttgcag
aaagggaaagtcagcaagtctccagacagcaccctcaggtccccgtcctcacccatccag
gaggaagatgaagagaagctctctgagatgtcagacgctcagcccccc
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