Tetraodon nigroviridis (spotted green pufferfish): GSTEN00034504G001
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Entry
GSTEN00034504G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K19538
retinitis pigmentosa 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tng03037
]
GSTEN00034504G001
04812 Cytoskeleton proteins [BR:
tng04812
]
GSTEN00034504G001
Cilium and associated proteins [BR:
tng03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
GSTEN00034504G001
Cytoskeleton proteins [BR:
tng04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
GSTEN00034504G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-ProteinID:
CAG12276
UniProt:
Q4RH56
LinkDB
All DBs
Position
undetermined
AA seq
1379 aa
AA seq
DB search
MSNTPPQEPPGPELSFGSGQTLHSRPNQPVSDPSASKRVCFYKSGDYKFSGHRIVINGRT
FKTYDALLDALSKKVPLPFGVRTITTPRGTHLVRTLDDLHDGGSYVCSDQKRVKPLNLEE
VKRRQVPWNTTRPLTAGRRQRLQIGKRSEAANRPAKVTEKVAVRTPKKLVVISNRDPTFK
RTIVLHRRSAPTFDALLDYLSQILQFPVLKLYSTDGRRIDGLAALILCSGVVVAAGNEPF
KLGNYGFHKIGQITQAMLTDIGLGLQPKTRSRNFSLSSERFIVEQVNKSRNGSRSSQLCH
EGAPVEALAEHPGKFLQPRGSDVAFNEQRSLIVPHEDDIEKSFRVNEDGSMTVEMKVHLT
IKEAEVLHWTTTLSRSSLSKKTVYATGSANSSPDSNNAVAKHSFICEEETKEENCPVEPG
RAVAFKKQTCEGYNSATKKVKSLSRRIPTPGPRQYVENWLEKVSPDREPYSEETFADDSE
ARAKVEFQIGGDSEENDKTEDDSRELCQSPGEEHVAGLCAGRRETRPQTHKPTQAILSAS
SASKEKIKPIMQQICSAVQFIKRASDTNTPPRPDSANSADKFSMQVASVFGSSCKLFLSF
LSMMILQDYITGSQSRSASEATLMMESLQRVSTAEDEEEQRVSLEDLRNRASFQLKKSWK
DFMDLSDRTETETELMLNVKAVDVFKDQCLIIDELMWEMNISQDLREVISSALRLASSFC
PVEENATLETGRNQLDQAKESEMGDELGRREGTGEKMIRKENEEKIEEELKEEMAVKVRD
ELGSVEAGEMEVSEKEFKDEEAGEDEANKSLDELKDIEETEEEREAHTENVGESQKAEER
LKEGTEGGDENDEMQSKGKDINSGGEETVAFTGKDVACNPNEQQVEDEVIREKTEETNGK
NKNEEDKVAVEAGGEFAGNTKSVSTCEEEDEQSDRSMDQEGWYDDSNEEGNVPNKAAGDL
DSEDKTTVDSNLEQENVPESPFKYSFEDQCEDDKGNGTDTVTEDGEEHCGERSDYLPHPL
EISQELLDFVNSALQSSSLIFTYDPQGNVRLEPDNSQRVKNRQALIAKSRRDSQYGGKIL
PSPSTSELSDYRPETSESWGSKTQESTDIATESGEDASDESLVSKHKTKILSQEPNAEPA
NTGSSANVFHDSQEQSRGSFSSFSSETEPLKRVISKPATEVTPVSSLSLVGDSPDGVLID
QGRWLLKENHLIRKSPPLSSGMYGNADSTSTDSIEDTVTHAQTQLNPLTYISSSEIEELT
KPKTPKCTYYNMSHGSDSDPFLDDCSLKSEKSATSIGKRRGVRVSPAIDTSKTWVSKNGS
LSSFASVEFKMPDGKIHPEEESSAVAQTRRTSSDARRILQAQDSQDTRHMSCSQYCPIL
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacacgccccctcaggagccccctggtccggaactgtcttttggcagcgggcag
accttacactcacgacccaaccagccagtgtcagacccatcagcatctaaacgagtgtgc
ttctacaaaagcggcgactataaattcagcgggcatcgcatagtcatcaatgggcgcact
tttaagacgtatgatgccctcctggacgccctgtccaagaaagtgcctctgccttttgga
gtgcggaccattaccacgccgagagggacccaccttgtgagaaccttggatgacttgcat
gacggcggatcgtacgtgtgttctgaccaaaaacgggtgaaaccgttaaatctggaggag
gtgaagcggcgacaggtgccctggaacacaaccaggcccctcactgcaggacgacggcag
cgcctccagattggaaaaaggagcgaagctgccaacaggccggcaaaggtcactgagaag
gtggctgtgaggacgccaaaaaagcttgtggtcatcagtaaccgggatccgacatttaaa
cgcacaattgtcctgcatcgaagatctgctcccacttttgatgctttgctggattatttg
tcccagattctgcaattcccagtgttaaaactttactcaacagacggcagaagaatcgac
gggcttgcagcactcattctgtgctccggtgttgttgtggcagctggcaatgagccattc
aaattaggaaactatggtttccacaaaataggccagataacccaagcaatgctcacagac
atcgggctgggcttgcagccaaaaacacgctcaaggaatttttcgctatcgtcagagaga
ttcattgtcgagcaagtgaacaaatctcgaaatggaagccggagcagccagctgtgtcat
gaaggcgctcccgttgaggcattagccgagcatcccggcaaatttctgcagccccgtggc
agtgacgtcgctttcaacgagcagcgttccttaattgtaccccatgaggatgacattgaa
aaatcgttccgtgtgaatgaggatggcagtatgacagtggagatgaaggttcacctaacc
atcaaggaggcggaagtgctccattggaccaccacgctgagccgctccagccttagcaag
aagactgtttacgctactgggtcggccaacagctcgcctgactcaaacaacgcagttgcc
aaacactccttcatctgtgaggaggaaaccaaagaggagaactgtcctgtcgaacctggt
agagccgttgcttttaagaagcagacttgcgaaggttacaactcagctacaaaaaaagtg
aaatccctttccaggcgtatccctacgccaggtcctcggcagtatgttgagaactggttg
gagaaggtcagccctgacagggagccgtactccgaggagacctttgcagatgactcggaa
gctcgggcgaaagtcgagtttcagataggaggagattccgaggaaaacgataaaaccgag
gacgacagccgtgaactttgccagtcaccgggcgaagagcacgtcgctggcttgtgtgca
gggcgccgggaaacgagacctcagacgcacaaacctacacaggccatcctttcagcttca
tcagcctccaaagagaagataaagcccatcatgcagcagatttgttcagcggtgcagttc
atcaaaagagcttccgacaccaacacaccacccagaccagacagtgccaacagcgcagac
aagttctcgatgcaagtggcttcagtttttggctcttcctgcaagctcttcctgtccttc
ttgtcgatgatgattctgcaagattacataaccggcagccaatcacgaagcgcctccgag
gccacactgatgatggagtccctgcagagagtttccactgccgaggatgaggaagagcag
cgggtgagcttggaagatctgaggaacagagcttccttccagttgaaaaaaagctggaaa
gattttatggacttgagcgacaggactgaaacagaaacagaattaatgttgaacgttaaa
gcggtggatgttttcaaagaccagtgtttgataattgacgagctaatgtgggaaatgaat
atttctcaagatctcagagaggtgatttcttcagcgctcaggttagcttcaagtttttgt
cctgtagaggaaaacgccacgctggaaactggaaggaaccagttggaccaagctaaagag
tctgaaatgggagatgagctgggacggagggaggggacaggagaaaaaatgattagaaaa
gaaaatgaggagaaaatagaggaggagctaaaggaagagatggctgtgaaggtgcgagat
gaattgggcagtgtagaggcaggagagatggaagtgtccgagaaggaattcaaggatgaa
gaagcaggagaggatgaggctaataaaagtcttgatgaacttaaagatattgaagagaca
gaggaggaaagagaggctcacaccgagaatgtgggagaaagccagaaggcagaggaaagg
ttgaaggagggtacagaaggaggagatgaaaacgatgagatgcaaagtaaaggcaaagac
ataaacagcggtggagaagaaacagttgcattcacgggaaaagacgtggcatgcaaccct
aatgagcagcaggttgaggatgaggtcattagagagaagacagaagagactaacggaaaa
aacaaaaacgaagaggataaggtggcagtagaggccggaggagagtttgctggaaacact
aaaagtgtgagtacatgtgaggaagaggatgagcaatcagacagaagcatggaccaggaa
ggatggtatgatgacagcaatgaggagggcaacgtccctaataaggctgctggagatctt
gattcagaagacaagacaactgtggactctaatttagaacaagaaaatgtccctgaatct
ccattcaaatattcttttgaggaccagtgcgaggacgataaaggcaacggcacagacacc
gtgacagaggacggggaggagcactgtggagagcgaagtgactatcttccacatccgttg
gaaatatcacaggaattgctggactttgtgaactccgcgctacagtcctcgtctcttata
ttcacctacgatccgcaggggaatgtcaggctcgagccggacaattctcaacgtgtaaaa
aatagacaggccctcatagccaaaagcaggagggatagtcagtacggtggaaagatcctg
ccgagcccgagcacctctgagctatctgattaccggccagaaacatcggagagttgggga
tctaaaacacaggaatctaccgatattgccacagagagtggagaagatgcttcagacgag
tctctcgttagcaaacacaaaaccaaaatcctttctcaggagcctaatgcagagccagca
aacactgggagtagtgcaaatgtctttcatgattctcaggaacaaagcagagggagtttt
tcctcttttagctcagagacggaacccctgaaaagggttatatctaaacctgccacagag
gtaacaccggtctcctctctgtctttggtgggagactccccggatggggtcttgatcgac
caaggcaggtggctgctcaaggaaaaccacctcatcagaaaatctcccccactttcttca
ggaatgtacggcaacgctgacagcacgtccacagattcaatagaggatactgtgacccac
gctcaaacccagctcaaccctctcacgtatatttcctcatcagaaattgaggagctcaca
aagcctaaaactcctaaatgcacctactacaacatgtcgcacggaagcgactctgatccc
tttttggatgactgcagtttgaaaagtgagaaaagtgcaacaagcattggtaaaagaagg
ggagtccgtgtgtctcccgctattgacacatctaaaacttgggtgagcaaaaatggaagc
ctgtcttcgtttgcatcagtcgagttcaaaatgccagatgggaaaatccatccggaagag
gagtcctcagctgtggcacaaacgagaaggacatctagtgatgcgaggcgtatactgcag
gctcaggactcacaggacacgcgccatatgagctgtagccagtactgtcccatactttaa
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