Tetraodon nigroviridis (spotted green pufferfish): GSTEN00034593G001
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Entry
GSTEN00034593G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03010
Ribosome
tng04120
Ubiquitin mediated proteolysis
tng04137
Mitophagy - animal
tng04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
GSTEN00034593G001
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GSTEN00034593G001
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
GSTEN00034593G001
04137 Mitophagy - animal
GSTEN00034593G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tng03011
]
GSTEN00034593G001
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00034593G001
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tng04147
]
GSTEN00034593G001
Ribosome [BR:
tng03011
]
Ribosomal proteins
Eukaryotes
Small subunit
GSTEN00034593G001
Archaea
GSTEN00034593G001
Ubiquitin system [BR:
tng04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
GSTEN00034593G001
Exosome [BR:
tng04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GSTEN00034593G001
Exosomal proteins of colorectal cancer cells
GSTEN00034593G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribosomal_S27
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
Motif
Other DBs
NCBI-ProteinID:
CAG12343
UniProt:
Q4RGY9
LinkDB
All DBs
Position
undetermined
AA seq
140 aa
AA seq
DB search
VEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKHLEDGRTLSDYNIQKESTLHLVLRLRGG
AKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRECPADECGAGVFMASHF
DRHYCGKCCLTYCFNKPEDK
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
gttgagccttcggacactattgaaaatgtcaagactaaaatccaggataaagagggtatc
cctcctgaccagcagaggctgatctttgctgggaagcatctggaggacggacgcacgctg
tcggactacaacatccagaaggagtccacgctgcacttggtgctcagacttcgtggtggc
gccaaaaagaggaagaagaagtcttacacgactccaaagaagaacaagcacaagaggaag
aaggtcaagctggctgtgctcaaatactacaaggtggatgaaaacggtaaaatccaccgt
ctgcggcgcgagtgtcccgctgacgagtgcggcgccggtgtgttcatggccagtcacttc
gaccgccactactgcggaaagtgctgcctgacgtactgcttcaacaaacccgaagacaaa
DBGET
integrated database retrieval system
