Tetraodon nigroviridis (spotted green pufferfish): GSTEN00034614G001
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Entry
GSTEN00034614G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
GSTEN00034614G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00034614G001
Membrane trafficking [BR:
tng04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
GSTEN00034614G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IML1
DEPDC5_CTD
IML1_N
DEP
DUF3375
Motif
Other DBs
NCBI-ProteinID:
CAG12358
UniProt:
Q4RGX4
LinkDB
All DBs
Position
undetermined
AA seq
1143 aa
AA seq
DB search
FIEIAHPTDEYSPLLLQVKNLKEDLQKETISVDQTVAQAFKLRAYQDVIVNIINPKDVTL
DLVELTFKDQYIGRGDMWRLKKCLVSTCAYVTQKVEFAGIRAQTSELWLKGEKVTCGYIS
EDTRVVFRSTSAMVYIFIQMSSEMWDFDIYGDLHFEKAVNGFLSDLFAKWKEKNCSHEVT
VVLFSRTFYNAKTIDEFPELLRGSIRQNQEGRFFEDFYRVVAQNERRDEWTSLLVTIKKL
FVKYPLLVRLEETDAVPIGYNSTAAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVIT
PGVGVFEVDRQLMILTKQRMIDNGIGVDLVCMGEQPLHVSTIIQASTPLKVKTRVALSHP
ESQWLGTKPTTEKFRINKVHTLCSPKDTESSLPIQVDYDAHDAQVFRLPGPSRFQRTPNF
RLGREKEVCGRKSFGSLDVTAGIGVSPPVRFGGPEEQRSLTSNDSLGPVSSVLLIPRLPL
AQYEVSSSLGYTSTREMLEKMESQRDSSAPGRFTVGSAESPLHIRPGGYTPQRALINPFT
PSRMPLKLTSNRRRWMHTFPIGPSGEAIQIHHQMRQNMAELQGQQTDPAQNSAELQEIAY
HEATGRRTLPGQVGETGLYVGGVMEELTGSPGSNSSAGAGTAANRASSFDDSLLSTADPM
PSFCCTVGVDWKSLTTPACLPLTTDYFPDRQTLQNDYTEGCYDLLPHSDLDRREEEATVR
TAAEVFEEFICQRLMQGYQIIVQTQNRKPQPSVSTPLGSSPLYSRGLVSLRRAEEEETVY
WLSMGRTFHKVCLKDKIITVTRYLPKYPCETAQIQYSYSLCPPHSDGQFVSCWVEFGHER
LEEYKWNYLDQYICSAGSEDFRTGVQLLPEQKGLPLNCFISAEVVHWLINNVDGVTTQGI
AVDLMQKMLDEGLVAHASGDMMRTFIYGFYCYRIVGEKDGSNSQPPSTATGGWPGAALED
FALFQRKWFEVAFALEEQRHCDLPVFLLPWLPSRPSSYASRNSSFSRSFGGRSQAAALLG
ATVPEQKMVTLDVDVNNRSDRMEWCSCYYHGNFSLSTAFEIKLHWMAVTAAVLFEMVQGW
HRKAASCGFLLIPALEFPFALTSSLYGDPLRAQHFIPLNIQCLLKDDSDNLFEGKCKIAL
RCV
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
ttcattgaaatcgcccaccccaccgatgaatatagccctctcctactccaagtcaaaaac
ctaaaagaagaccttcaaaaagagacaatcagcgtagaccagactgtagcacaggccttc
aaattacgagcttaccaggacgtcatcgtgaacatcattaatcctaaggatgttacactg
gatctggtggagctaacatttaaagaccaatatattggcagaggagatatgtggagactc
aaaaagtgtttggtaagcacatgtgcttatgtaacacagaaagtggaatttgccggaatc
agagcccagaccagtgaactgtggttaaagggtgaaaaagtgacctgcgggtatatcagc
gaggacactcgggtggtgtttcgatccacgtctgccatggtttacatttttatccagatg
agtagtgaaatgtgggattttgatatatacggtgatctccactttgagaaagctgtgaat
ggattcctgtctgatcttttcgccaaatggaaggagaagaattgcagccacgaggtgaca
gttgtgcttttttcacgtacattctacaatgccaaaacaattgatgaatttcctgaactt
ctcagagggtcaattaggcagaaccaagaaggccgttttttcgaagacttttacagggtt
gttgctcaaaatgagaggcgtgatgagtggacgtcattgctggtcactataaagaagctt
tttgtcaaatatcctttgctggtgcgacttgaagaaacagatgctgttcctattggctat
aactctacagcagctcaaggaaactatctggaagccattaatctttcattcaatgtcttc
gacaagcattacatcaaccgtaactttgaccgcactggccagatgtcagtggtcatcaca
cctggtgttggcgtgtttgaagttgaccgtcagctcatgattcttaccaagcagcgtatg
atcgataatggtattggggtggacttggtgtgtatgggggaacaacctctccatgtcagt
accattattcaagcttctacacctctaaaagtcaaaactcgtgtagctctttcacacccc
gaatcacagtggctgggaaccaagcccactacagaaaagttcagaatcaacaaggtccac
actctctgctctcccaaggacacggaaagcagcctgcccatacaggtggactacgatgcc
cacgatgcccaggtgttccgattacctggtccttcacgatttcagaggactcccaacttt
aggttagggcgagagaaagaggtttgtgggagaaaaagcttcgggtccctggatgttacc
gcaggcatcggggtttcccctcctgttcggtttggaggtcctgaagagcagagaagttta
acatcgaatgatagtctgggccctgtgtccagtgtgctgctcattcctcgtctacctttg
gcccaatatgaagttagcagttctttgggatacacgagcaccagagagatgttagagaaa
atggagtcgcagagggactccagtgctccaggaagattcacagtgggaagtgctgagtcc
cccctgcacatccgtcctggaggctacaccccccagagggcgctcatcaatcctttcacc
ccgtccaggatgccactgaagctgacctccaaccgccggcgttggatgcacaccttcccc
atcggcccctctggagaggcaattcagatccatcaccagatgagacagaacatggctgaa
ctgcaaggccaacagacagatcctgcacagaactcagccgagctgcaggaaatcgcctat
cacgaggccactggaaggagaacacttccaggacaagtgggagaaacgggcctttatgtt
ggtggagtgatggaagaattgaccggaagtccaggcagcaacagcagtgccggtgcagga
actgcagccaaccgtgcctcctccttcgatgactctctcctcagcactgctgacccaatg
cccagcttttgctgtacagtgggggtggattggaagtccttgacgacaccagcttgcctg
cccctcactacggactacttccccgatcgtcagacccttcagaatgattacactgaaggc
tgctacgacctgctcccacacagtgacctggacaggcgtgaggaagaggccactgtaagg
actgctgccgaggtgtttgaggagtttatctgtcagagactgatgcagggctaccaaatc
attgttcagactcagaacaggaagccgcagccatctgtgtccacacctcttggaagcagc
cctctttactccagaggtctggtttctcttcgtcgagcagaggaagaggagactgtatat
tggctcagcatgggccggaccttccataaagtttgcctgaaagacaaaataatcactgtt
actcgctatttgccaaagtacccgtgtgagactgctcagatccagtatagttacagcctg
tgtccaccacactcagacggtcagtttgtgtcctgttgggtggagtttggtcatgaacgg
ctggaagaatacaagtggaactacctggaccagtacatctgctccgctgggtcggaggac
tttaggacaggtgttcagctcctcccagagcagaaaggcctgcctctcaattgcttcatc
agtgcagaggttgttcactggctgattaacaacgtggacggtgtaaccacacaaggaata
gctgtagatctgatgcagaaaatgctggatgaaggattggtggcccacgcttctggagac
atgatgcgcaccttcatttatggattctactgctacaggattgttggagagaaggatggt
tctaactcccagcctccctccacagctacagggggctggcctggagcagctctggaggac
tttgctctgttccagagaaagtggttcgaggtggccttcgcgctggaagagcagcgacat
tgtgatctcccggttttcctgctgccctggctgccaagcaggccgtcgtcctacgcgagc
aggaacagttccttcagccgcagctttggaggtcggagccaggccgccgcattactaggc
gccaccgttcccgagcagaaaatggtcaccctggacgtggatgtgaacaaccgcagcgac
cgcatggagtggtgcagctgttattaccacggaaacttctccctcagcaccgcctttgag
atcaagctccactggatggccgtcactgctgcagtcctctttgagatggttcagggctgg
cacaggaaagcagcctcgtgtggcttcctcctgattcctgctctggaatttcctttcgca
ctgacctcctccttgtacggagaccccctaagagcccagcacttcatccccctgaacatc
cagtgcctgctgaaggacgacagcgacaatctgttcgaaggtaaatgcaagattgcgctc
cggtgtgtttga
DBGET
integrated database retrieval system
