Tetraodon nigroviridis (spotted green pufferfish): GSTEN00034780G001
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Entry
GSTEN00034780G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06172
gamma-secretase subunit APH-1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04330
Notch signaling pathway
tng04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
GSTEN00034780G001
09133 Signaling molecules and interaction
04519 Cadherin signaling
GSTEN00034780G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aph-1
YqfD
MCP1_TM
DUF7396
Motif
Other DBs
NCBI-ProteinID:
CAG12490
LinkDB
All DBs
Position
undetermined
AA seq
217 aa
AA seq
DB search
MTAAVFFGCTFIAFGPAISLFVFTIAREPLRVIFLIAGAFFWLVSLLLSSLVWFISVQIS
DKDSAAQQKGLLIFGVVLSVVLQETFRFAYYKLLKKANEGLLTLSQEETMPISTRQLAYA
FMTMAIILLHMFWGVVFFDACEKQRWWAVAAVVISHLIVSCLTFQNPSYVASLVPTYVVL
FLMGIWAFYTAGGSLRNLKLCLTCKDKDLLLANHRSR
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgctgtgttctttggctgcactttcatcgccttcggcccggccatctccctt
tttgtgtttaccatcgctcgggaaccgctgcgagtcatcttcctgatagcaggagccttc
ttctggctggtgtctctgctcctgtcctccctggtgtggttcatctccgttcaaatcagc
gacaaggacagcgcagcccagcagaaagggctgctcatcttcggggtggttctgtcggtg
gtgctgcaggaaaccttccgcttcgcctactacaagctgctcaagaaggcaaatgaaggc
ctcctcactctcagccaggaggaaactatgccgatctccactcggcagctggcctacgcc
tttatgaccatggccattatcctcctgcacatgttctggggggtcgtcttctttgatgcc
tgtgagaagcagcgttggtgggccgtggctgccgtcgtaatcagccacctcatcgtctcc
tgtctaaccttccagaacccctcatatgttgccagtcttgtccccacctatgtggtcttg
ttcctcatgggcatctgggccttctacactgctggtggttcgctcagaaacctcaaactc
tgcctaacctgcaaggacaaggacctcctgctggcaaaccaccgctccaga
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