Tetraodon nigroviridis (spotted green pufferfish): GSTEN00035249G001
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Entry
GSTEN00035249G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10315
F-box protein 40
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00035249G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
GSTEN00035249G001
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-TRAF_2
F-box_4
F-box-like
F-box
Motif
Other DBs
NCBI-ProteinID:
CAG12804
UniProt:
Q4RFM8
LinkDB
All DBs
Position
16
AA seq
649 aa
AA seq
DB search
MNHLHCNQCYDAHCQVSAKLSDSCVVIKCPKNCGAILHACKQEEHQLLCPNETVACLNVL
YGCPLHVQRRRLAKHLEVCPASVVCCSQEWNRWPVSEGDMNFYRKLSENPQCLDNLDVAT
AVRDQELLFRSIKMKTIFPELIKNSSAEINSYVEKAGCSSVCGNLTESADPRPEVKHSIQ
EGRETQVKSRDGNSVQEHGAWEEICTKEIFGGKQTVKSFNAGGRVKEEKEASNCQDDKQK
IHRIQETPSAVQSLDGTTGLAPWQDGVLERLRKEANIAEYNMYLVHNGAMLINFGQLAAC
TPREKDFVYGNLEPIEIQTVRTFNIPSSYRAKRHHLKNPAHKVPTKHQSAETADLAEAVQ
NSPERDEVSATLLCSLEKELKGHFISESVPIDGLYVDTGTQTYNFAAAPFSRDASLADVV
AGRPRLLYLHLQTESVTRRHNKTSSAFSHTCGLFFRRDEYRSHYRNVHLDIQSSLCGWFQ
QRCPLAYLGCTFTQTRFHPAGQQATIKFCQGPDTFVLQPEVPSVLCEGRRAPSPPRNPED
TREPLSSLPLEILQQIAAYLDSFTLSQLSQVSHLMRAVCATLLQERGMVSLKWEREAPSH
GGRSWKCQKKANLGVQLSVFPGEQMELQQHSFSVRSPEKLLLLPERGAH
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaccttcactgcaaccagtgttatgatgctcactgccaagtctcagcaaagctt
tcagactcctgcgttgtcatcaaatgtccgaaaaactgcggcgccatcctccatgcatgc
aagcaagaggagcaccagctcctctgccccaatgagacggtggcctgcctcaacgtcctg
tacggttgccctctccacgtgcagcgccgcaggctggccaaacacctggaggtgtgtcct
gccagcgtcgtctgctgctctcaggagtggaaccgctggcctgtttcagaaggtgatatg
aacttctacagaaagctttcagaaaatcctcaatgtttggacaaccttgatgttgctaca
gctgtcagagatcaagagctgctgttccggtccatcaagatgaagaccattttccctgaa
ttgataaagaattcatctgctgagatcaatagttatgtcgagaaagcaggctgttcttcg
gtctgtggtaacctcacagaaagtgccgacccaagaccggaggtcaaacattcaattcaa
gaagggagagaaactcaggtgaagagtagggatggaaacagtgttcaggaacatggcgcc
tgggaggaaatctgtacaaaagagatatttggaggcaagcagacagtcaaaagcttcaat
gcaggaggaagggttaaggaggagaaggaagcatccaactgtcaagacgacaaacaaaag
attcaccgaatccaagaaactccttctgctgtccagagtttagatggaacaactggtctg
gcaccctggcaggacggggttctggagcggctgaggaaggaagccaacatcgctgaatat
aacatgtatctggtgcacaacggggccatgctcatcaactttggccagctggccgcctgc
actcccagagaaaaggactttgtttacggaaacctggagcccattgaaattcaaaccgtc
cgcacgttcaacatcccctccagctaccgtgcaaagcggcaccacctgaagaaccctgcg
cacaaggtcccgaccaaacaccagagcgctgagactgcagatctggccgaggccgtgcaa
aactcccccgagcgggatgaggtgagcgccacacttctgtgctccctagagaaggagctg
aaaggccatttcatctcggagagcgtgcccatagacggcctgtatgtggacacggggaca
cagacgtacaacttcgccgccgctcctttcagcagggacgcatcgctggcggacgtcgtc
gcaggcagacccaggcttctgtatctgcacctccaaacagaatctgtcaccagaagacac
aacaaaacgagctcggccttcagccacacgtgcgggctcttcttccgccgcgatgaatac
agatctcactacaggaacgtgcacttggacatacagtcgtctctgtgtggctggttccag
cagcgctgtcccctagcgtacctgggctgcactttcacacagacgaggtttcaccctgca
ggtcagcaggcaacaataaaattctgccaaggccctgatacttttgtcctccagcctgaa
gtgccttcagtcctgtgtgaaggcaggagggctccaagccccccgaggaatcctgaagac
actcgggagcccctgagcagccttcccctggagatcctgcagcagattgccgcctacctt
gacagctttacattatctcagctgtcccaggtctcacatctgatgagagctgtgtgcgcc
acattgctacaggaacgagggatggtctcactcaagtgggagagagaggcaccttcccat
gggggacgctcctggaaatgtcaaaagaaagcaaatttgggagttcagctctctgttttc
cccggtgaacagatggagcttcagcaacattccttcagtgtcagatcacctgaaaagctg
cttcttctaccagagagaggagcgcactga
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