Tetraodon nigroviridis (spotted green pufferfish): GSTEN00035841G001
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Entry
GSTEN00035841G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10839
UV excision repair protein RAD23
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03420
Nucleotide excision repair
tng04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
GSTEN00035841G001
09124 Replication and repair
03420 Nucleotide excision repair
GSTEN00035841G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tng03051
]
GSTEN00035841G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00035841G001
Proteasome [BR:
tng03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
GSTEN00035841G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
GSTEN00035841G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
ubiquitin
XPC-binding
UBA_7
Rad60-SLD
Crinkler
Rad60-SLD_2
Dsc3_N
UBA_3
Ubiquitin_5
CUE
Ubiquitin_4
OTU1_UBXL
ALIX_LYPXL_bnd
UBA_9
FYVE_2
Motif
Other DBs
NCBI-ProteinID:
CAG13273
UniProt:
Q4REA9
LinkDB
All DBs
Position
4
AA seq
366 aa
AA seq
DB search
MLITLKTLQQQTFKIEIDEEETVKRLKEKIEEEKGKDHFPVSGLKLIYAGKILSDDKPLK
EYKISDKNFVVVMATKPKTAAAAPQPSAAGTTAPPALDPGPDPCRRHRLRPPPPPPRPEN
RCSIVFIDLTAPPPPLPPSRGSEGSSGTNLIDEAVSNLVTGPSYESMVNEIMLMGYEREQ
VVAALRASFNNPDRAVEYLLTAAGPAAEATPASSAPAAPAGTGSPAGAEGVNPLSFLRNQ
PQFQQMRQLIQQNAALLPTLLQEIGRENPELLRVTLAARTQRCSASTSAPHLIFXXXGAT
AAGMAGGTAGENPMRYIQVTAQEKEAIERLKELGFPEGLVIQAFFACEKNENLAANFLLQ
QNFDDE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgctgataactttgaaaaccttacaacagcagacgtttaagatcgagatcgacgaggag
gagacggtgaagaggttaaaggaaaagattgaagaggagaaaggaaaggaccatttccca
gtttctggactgaagctgatctatgctggaaaaatcctcagcgatgacaaacccctcaaa
gaatacaagatcagcgacaagaattttgtggttgtcatggccacaaagcctaaaacggca
gcagcggccccgcagccctcggccgccggcacgacggcgcccccagcccttgaccccggc
cccgacccctgccgccgtcaccgcctccgccctcctcctcctcctcctcgtccagaaaac
aggtgttctatcgttttcattgacctaacagcccccccccctcctcttccccccagcaga
ggatctgaagggtcgtcaggcaccaacctgatcgatgaggcagtttccaatctggtgacg
ggaccgtcgtacgaaagcatggtgaacgagatcatgctgatgggctacgagagagagcag
gtggtggcggcgttgagggcgagcttcaacaaccccgaccgagccgtggagtacctgctc
accgccgcaggacccgctgcagaggcaaccccggccagctcggcccccgccgcgcccgcc
ggcaccggctctccggccggcgcagaaggagtcaaccccctgagtttcctaaggaaccag
ccgcagtttcagcaaatgcgccagctcatccagcagaacgccgcgttgctgcccactctg
ctgcaggagatcggcagggagaacccggagctgctgcgggtgacgctcgccgcccggacg
cagcgttgctctgcttccacctcagcgccgcatctgattttttnnnnnnggggagcaacg
gcagcagggatggcaggaggcactgctggcgagaacccgatgagatacatccaggtcaca
gcacaggagaaggaagccatcgagaggctaaaagaactgggatttccagagggactcgtt
atacaagccttcttcgcctgcgagaagaacgagaacctggctgccaacttccttttacaa
cagaactttgacgatgagtaa
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integrated database retrieval system
