Tetraodon nigroviridis (spotted green pufferfish): GSTEN00037577G001
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Entry
GSTEN00037577G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K09444
interferon regulatory factor 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
GSTEN00037577G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00037577G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
GSTEN00037577G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
Seryl_tRNA_N
Zn_peptidase_2
Motif
Other DBs
NCBI-ProteinID:
CAF87280
UniProt:
Q4TIK2
LinkDB
All DBs
Position
7
AA seq
183 aa
AA seq
DB search
MPVSRMRMRPWLERMINSDTIEGLTWLDPEKTMFSIPWKHAARHGWAIEKDANLFKMWAI
HTGKYVEGRTSDPKTWKANISCAMNSLPDIEEVKKMSINKGHQAVRVFKMLPAATKSKDK
RSKAKEARSRRKSASVKVAEEMVDSSDTQSSVNESTTDSFSPQHSNVNTSQQELRIRVPG
RGP
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgtccaggatgaggatgaggccgtggctggagaggatgatcaactccgacacc
atcgagggtctgacctggctcgacccggaaaaaacgatgttctccattccctggaagcat
gcggccagacacggctgggccattgaaaaagatgccaacctgttcaagatgtgggccatc
cacacaggcaaatacgtggagggcagaacgagcgaccccaagacatggaaagccaacatt
tcctgcgcgatgaactcgctgcccgacatcgaggaggtgaaaaagatgagcattaacaaa
ggccaccaagccgtgcgtgtcttcaaaatgttgcccgcggccacaaaatctaaagataag
cgaagcaaagccaaggaggcgcggagtaggaggaagagcgctagcgtcaaggtcgcagaa
gaaatggttgacagcagcgacacccagtcctcggtcaatgagtcgacgacagactcattc
tctccccagcacagcaacgtcaacacatcgcagcaagagctcaggattcgagttccagga
cgaggtccctga
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integrated database retrieval system
