Thioalkalivibrio nitratireducens: TVNIR_0079
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Entry
TVNIR_0079 CDS
T02408
Symbol
lysA_[H]
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni00300
Lysine biosynthesis
tni00470
D-Amino acid metabolism
tni01100
Metabolic pathways
tni01110
Biosynthesis of secondary metabolites
tni01120
Microbial metabolism in diverse environments
tni01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TVNIR_0079 (lysA_[H])
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TVNIR_0079 (lysA_[H])
Enzymes [BR:
tni01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
TVNIR_0079 (lysA_[H])
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AGA31792
UniProt:
L0DS26
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All DBs
Position
64006..65259
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AA seq
417 aa
AA seq
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MDHFDLRDGVLHCELVPLTEVAEAVGTPAYVYSRATLTRHYHAFANALEGIPHQVCFAVK
ANSSLAVLNVLARLGAGFDIVSGGELERVLRAGGEPGKVVFSGVGKTAGEMRRALQVGIH
CFNVESGPELELLNAVAGDMGLRAPIAIRVNPDVDAETHPYIATGLRENKFGVDIAAAHA
LYLEATRLGHLEIRGVGFHIGSQLTRLTPFTDALRRVLALADDLERDGIGLAHIDVGGGL
GVRYRDETPPEPADYAAALRELLADRNWPVLLEPGRAIAANAGVFLTRVELLKHTAHKDF
AVVDGAMNDLIRPALYGAWQEIVPVSPRNGESRRYDVVGPVCETGDFLGRERELVLAPGD
LMAVRSAGAYGYVMASNYNSRPRPPEVMVDGDRYYIVNRREQVDHLMMRESMLPVAD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggatcactttgatctgcgtgacggcgtgctgcactgcgagttggtgccgctgaccgaa
gttgccgaggcggtcggcaccccggcctatgtgtattcgcgtgcgactctgacccgccac
taccatgcgttcgccaacgcgctcgagggcatcccgcaccaggtctgcttcgcggtcaag
gcgaattccagcctggccgtgctgaacgtgctcgcgcgcctcggggccggtttcgacatc
gtttcgggcggcgagctggagcgggtgctgcgcgccggcggggaacccggcaaggtggtc
ttttccggggtcggcaagacggcgggcgagatgcgccgggccctgcaggtgggtatccat
tgcttcaacgtcgaatccgggccggaactcgaactgctgaatgcggtggccggggacatg
ggcctgcgcgcgccgatcgcgattcgggtgaacccggacgtggatgcggagacacacccc
tacatcgcgaccgggctgcgcgagaacaagttcggggtcgacatcgcagccgcgcacgca
ctgtacctggaggccacgcgcctcgggcacctggagatccgaggcgtcgggttccacatc
ggctcgcagttgacccggctgactccgttcaccgacgccctgcggcgcgtgctggcgctc
gccgacgacctggagcgcgacgggatcgggctcgcgcacatcgacgtcggcggaggcctg
ggcgtgcgctaccgcgacgagactccgcccgagccggccgactatgccgcggcgctgcgc
gaattgctcgccgaccggaactggccggtattgctcgagccggggcgggcgatcgccgcg
aacgcgggggtgttcctgacccgggtcgagttgctgaaacacacggcgcacaaggacttc
gcggtcgtcgacggggcgatgaatgacctgatccgccccgcgctgtacggagcctggcag
gagatcgttccggtctcgccccggaacggggaatcgcggcgctacgatgtggtcgggccg
gtctgcgagaccggcgacttcctcggccgcgagcgcgagctggtgctcgcaccgggcgat
ttgatggcggtgcgctctgccggtgcctatggatacgtgatggcaagcaactacaacagc
cggccgcgtccgcccgaggtgatggtcgacggcgaccgttactacatcgtgaaccggcgc
gaacaggtggaccacctgatgatgcgcgagagcatgctgccggtggcggactga
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