Thioalkalivibrio nitratireducens: TVNIR_0136
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Entry
TVNIR_0136 CDS
T02408
Symbol
recC_[H]
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TVNIR_0136 (recC_[H])
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tni03400
]
TVNIR_0136 (recC_[H])
Enzymes [BR:
tni01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
TVNIR_0136 (recC_[H])
DNA repair and recombination proteins [BR:
tni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TVNIR_0136 (recC_[H])
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecC_C
Exonuc_V_gamma
Motif
Other DBs
NCBI-ProteinID:
AGA31848
UniProt:
L0DS66
LinkDB
All DBs
Position
125727..128639
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AA seq
970 aa
AA seq
DB search
MHRRFIPRIRDLDQRPPGLPRRVVVFGISSLPSQALEALEALGRLSQVLLCVHNPCEHYW
ADIVADRDLLRAQRRRQARKPGMPEDLGEADLHQHAHPLLAAWGKQGRDYIRLLDEHDDP
QRYGHLLEALRWQRIDVFEPHGGTTLLNQLQDDIRELRPLHETCVHWPAVNPARDESLRF
HIAHSPQREVEVLHDRLLDRFQRDPELRPRDVIVMVPDVETYAPHVQAVFGQIDPGDPRH
IPFALSDRSRRGREPLLVALERLLALPESRLAVSDLLDLLEVPAVRRRFGIGAQQLYLLH
AWIEGSGIRWGLDGAQRASLGLPGGLEQNTWRFGLRRMLLGYAVAGPGTPSVDWSGIEPY
DEVGGLDAAMVGQLDALLSALARWWSRLRQDAIPAQWGDRLRMLLADFFAAEDEREQGLL
SQLDEALEAWEGACALARLEETLPLAVVRDSWLAAVDEPGLAQRFLGGAVNFCTLMPMRA
IPFRVVCLLGMNDGDYPRIPTPMDFDLMAGNYRPGDRSRREDDRYLFLEALLSAREQLHL
SWVGRSVRDNAPRPPSVLVTQLRDHLAAGWRLAEPAAGDGTGAEGPWLLRALTAEHPLQP
FSPRNFPSDGTGPLFTYAREWNAVHAPRSQGRSGVGEPGDPGERPAIGQPLAERPADAPL
APEDLGGFLRNPVKSFFNRRLGVFFDEETPAAEDQEPFVLDGLSRWSARDYLVGNALADP
DSPERWEASLTAALATLRRSGQLPLAGLGSIVADELRSEIGDLLERYREAIARLPRRVER
PEQVRFEHAGLVVEGMLTGLRAEATGAPALLRHRAGPLRGKVPAWRYDVFAHAWVTHLLA
NASGLELTTVLVGTDTGLDWAPVPAADAADALRSLLDGWSAGQRSPLPVACQTACAWLEA
EAAGKDPGAAAAGAYEGGWQSAGELGRSPYHARAFPSAGHLLGAEGFVHWAHALYRPLFG
AVHVAAETAA
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
gtgcaccggcgcttcatcccacggatccgcgatctcgaccaacggccgcccgggttgcca
cggcgggtcgtcgtgttcggcatctcgtcgctgccctcccaggcgctcgaggcgctcgag
gcgctcgggcgtctgagccaggtgctgctctgcgtccacaatccctgcgagcactactgg
gcggacatcgtggccgatcgggacttgctgcgggcgcagcgacggcgccaggcccgcaag
ccgggcatgcccgaagatctcggcgaagccgacctgcatcagcatgcgcacccgctgctg
gcagcctggggcaagcagggccgggattacattcgcctgctcgacgagcatgacgatccg
cagcgctatgggcacctgctcgaggcgctgcgctggcagcggatcgacgtgttcgagccc
catggcggtacgacgctgctgaaccagctgcaggacgacatccgcgagctccggccgctg
cacgagacgtgcgtgcactggccggcggtgaacccggcccgcgatgaatcgctgcgcttt
catatcgcgcacagcccccagcgcgaagtggaggtgctgcacgaccgattgctcgatcga
ttccagcgcgaccccgaactgcgcccgcgcgacgtaatcgtgatggtgccggatgtcgag
acctacgcgccgcacgttcaggcggtcttcggccagatcgaccccggggatccgcgtcat
atcccgttcgcactgtcggaccgcagccggcgcggccgcgaacccctgctggtggcattg
gagcgtctgctggcactgcccgagtcgcggctcgcggtcagcgatctgctcgatctgctc
gaggtgccggctgtgcggcggcgcttcggcatcggtgcccagcagctgtacctgctgcat
gcctggatcgagggctccggcatccgctgggggctggacggcgcccagcgcgccagcctc
gggctgcccggcgggctcgagcagaacacctggcgtttcggcctgcgccggatgctgctg
ggctatgcggtcgcagggccgggaaccccatccgtggattggtccggcatcgaaccctac
gacgaggtcgggggcctcgatgccgcgatggtggggcagctggatgcactgctgtcggcg
cttgcgcgctggtggtcgcgcttgcggcaggacgcgataccggcacagtggggcgatcgg
ctgcgcatgctgctcgcagacttcttcgcggccgaggacgagcgcgaacaggggttgctg
agccaactggacgaggcactggaggcatgggaaggagcgtgcgcgttggcccgcttggaa
gaaacgttgccgctggcggtggtacgcgacagctggctcgcggccgtcgacgaacccggg
ctggcgcagcgtttccttggcggggcggtgaacttctgcacgctgatgccgatgcgagcg
atcccgttccgggtggtctgcctgttggggatgaatgacggtgactacccgcgcattccg
acgccgatggatttcgacctgatggcgggaaactaccggcccggggaccgttcccggcgt
gaagacgaccgctacctgttcctggaggcgctgctctcggcgcgcgagcagctgcacctg
agctgggtcgggcgcagcgtgcgtgacaacgccccgcgtccgccatcggtactggtcacg
cagctgcgcgatcacctcgccgccggctggcgcctcgcggaaccggctgcgggcgacggg
accggcgccgaagggccgtggctgctgcgggcgctgaccgccgagcacccgctgcagcca
ttcagcccccgaaactttccgtcggacggcaccggcccgctgttcacctacgcccgcgag
tggaacgcggttcatgcgccgcgatcgcaaggccgatcgggtgtgggcgaacccggggat
cccggcgaaaggcccgcgatcgggcagcccctggccgaacggccggccgatgccccgctg
gcgccggaggatctcggcggatttctgcgcaaccctgtgaagagcttcttcaatcgcagg
ctcggagtcttcttcgacgaagagacccccgcagccgaggaccaggagccgttcgtgctg
gatggtctcagccgctggtcggcgcgcgattacctcgtgggcaacgcgctcgccgacccc
gactccccggaacgctgggaggccagtctcaccgctgcgctggcaacgctgcgtcggtcc
gggcagctcccgctcgctggcctcgggtctatcgtcgccgacgagttgcgcagcgagatc
ggcgatctgctggagcgttaccgtgaggccatcgcacgtctgccgcggcgcgtcgaacgg
ccggagcaggtgcgtttcgagcatgcgggcctcgtggtcgagggaatgctgaccggcctg
cgcgcggaagccaccggcgccccggcgctgcttcgccaccgcgccgggccgctgcggggc
aaggtgcccgcttggcgctacgacgtgttcgcccatgcctgggtcacgcacctgctggcc
aatgcttcgggactggagctgacgacggtgctggtcggaaccgacaccggtctggactgg
gcgccggtgcccgcggccgatgccgctgacgcgctgcggagtttgctggacggctggagt
gcgggccagcggagccccctgccggtggcctgccagaccgcctgcgcatggctggaagcc
gaggcggcgggcaaggatcccggcgcggctgcagcaggcgcctacgaggggggctggcag
tcggccggggagctcggccgcagcccttaccatgcccgcgccttcccgagcgccgggcat
ctgctcggggcggagggtttcgtgcactgggcccacgcgctgtaccggccattgttcggg
gcggtgcatgtggccgcggagacggccgcatga
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