Thioalkalivibrio nitratireducens: TVNIR_0152
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Entry
TVNIR_0152 CDS
T02408
Symbol
yprA_[H]
Name
(GenBank) ATP-dependent RNA helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
tni
Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
TVNIR_0152 (yprA_[H])
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GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
WHD_HRQ1
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AGA31865
UniProt:
L0DSB5
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Position
147799..150216
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AA seq
805 aa
AA seq
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MSEAAGAVQVDTGSDDPVRWLVRRLKTRYRGRITGNVVLPGRPARLLPLPDGLDPRLASA
LRARGVVQLYSHQREAWDAVTAGRHTVVVTPTASGKTLCYNLPVLQSALTNRAKALYLFP
TKALSQDQVAELMELNEAGGLGIRAFTFDGDTPGDARKAVRTRGDIVVSNPDMLHQGVLP
HHTKWAQFFENLRYVVIDEMHSYRGVFGSHVANVIRRLRRVCQFYGSDPVFVLSSATIAN
PAELAEGLIGEPVTAITESGAPAGERHLLLWNPPVVNADLGIRASARSQATRIARMAVKS
GLKTIVFAQSRLMVEVLTKYLKDVFDADPRKPARVAAYRGGYLPGQRRETEKALRAGNVD
CVIATSALELGVDIGSLDVCVLNGYPGTIAATWQRLGRAGRRQRPSLGVLVATSQPLDQY
IIRNPEFFLESSPEHARIDPDQLLILLDHVRCAAFELPFRRGDRFCKENLEELLTYLEEH
GVLHREADTWHWTEDSYPAQSVSLRSVAEGNFVVVDTTGGRKDIIAEVDYSSAAETLYEG
AIYMVQAQTWQVERLDWTGRKAFVTKTEVDYYTDAIDYTRLKILDRFEHRQDGRTETAHG
EVHLVRRIPGYKKIRYYSHENIGYGNIDLPDQEMHTTAAWWEVAPEVLAQWFPNRQQALD
GFLGAAYAMHHVAALIAMSEPQDIGRAVGDGDARWFATVGTDGRGQMRSLEGGEQDPERE
TRFRPAVFLYDNYPGGVGLAAPLYDQRDRVIGDAARLIRDCDCRHGCPACIGPILASDEE
RGFSPKAAALTVLAQFLADGPETPA
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggcggccggggcggtgcaggtggataccgggagcgacgacccggtgcggtgg
ctggtgcggcgcctgaagacccgctaccgggggcggatcaccgggaatgtggtgctgccc
gggcgcccggcgcggctgctgccgctgcccgacggactcgacccgcgcctggcgtccgcg
ctgcgcgcccgcggcgtggtccagctctacagccaccagcgcgaggcctgggacgcggtg
accgccgggcggcacacggtggtggtcactcccaccgcgtcgggcaagacactctgctac
aacctgcccgtgctgcagtccgcgctcacgaaccgggcgaaggcgctgtacctgtttccg
accaaggcactgtcgcaggaccaggtcgccgagctgatggagctgaacgaggccggaggg
ctcggcatccgcgcgttcaccttcgacggcgacacgcccggcgacgcacgcaaggccgtg
cgcacccggggcgacatcgtcgtgtcgaacccggacatgctgcaccagggtgtgctgccg
caccacaccaagtgggcgcagttcttcgagaacctgcgctacgtggtgatcgacgagatg
cacagctaccgcggcgtgttcggctcgcacgtcgcgaacgtgatccgccggctgcggcgc
gtctgccagttctacggctccgacccggtgttcgtgctcagctcggccaccatcgcgaac
ccggcggagttggccgagggcctgatcggcgagccagtgaccgccatcaccgagagcggc
gcgcccgccggcgagcgccacctgctgctgtggaatccaccggtggtgaatgccgatctc
ggcatccgcgcgtcggcgcgctcgcaggcgacgcgcatcgcccggatggcggtgaaaagc
gggctgaagacgatcgtgttcgcgcagtcgcggctgatggtcgaggtgctgaccaagtac
ctgaaggacgtgttcgacgccgatccccgcaagccggcacgggtcgccgcctaccgcggc
ggctacctgcccggccagcggcgcgagaccgagaaggcgctgcgtgccggcaacgtcgac
tgcgtgatcgcgacctcggcattggaactcggcgtcgacatcggcagcctcgacgtctgc
gtgctgaacggctatccggggacgatcgcagcgacctggcagcgcctgggccgggccggg
cgtcgccagcgtccgtcgctcggcgtgctggtggcgaccagccagccgctggatcagtac
atcatccgcaacccggagttcttcctcgaaagctccccggagcacgcgcgcatcgatccc
gaccagttgctgatcctgctcgaccacgtgcgctgcgcggcgttcgaactgccgttccgc
aggggcgaccgtttctgcaaggagaacctcgaggaactgctgacctacctcgaggagcac
ggcgtgttgcaccgcgaggccgacacctggcactggaccgaggacagctaccccgcgcag
agcgtgagcctgcgctcggtcgccgaaggcaacttcgtcgtcgtcgacaccaccggcggg
cgcaaggacatcatcgccgaggtcgattactccagcgccgccgagacgttgtacgagggt
gcaatctacatggtgcaggcgcagacctggcaggtcgaacggctggactggaccgggcgc
aaggcgttcgtgaccaagaccgaggtggattactacaccgacgcgatcgactacacgcgc
ctgaagatcctcgaccgcttcgagcaccgccaggacggacgcaccgagaccgcgcacggc
gaggtgcacctggtccggcgtatccccggctacaagaagatccgctactacagccacgag
aacatcggctacgggaacatcgacctgccggaccaggagatgcacacgaccgccgcctgg
tgggaggtcgcaccggaggtgctggcgcagtggtttccgaaccgccagcaggcactggac
ggcttcctcggcgcggcctatgcgatgcaccacgtggcggcgctgatcgcgatgtccgag
ccgcaggacatcggccgcgcggtcggcgacggcgacgcccgctggttcgcgaccgtcggc
acggacgggcgcgggcagatgcgcagcctcgaaggtggcgaacaggatcccgagcgcgaa
acccggtttcgccccgcggtgttcctgtatgacaactacccgggcggcgtcgggctcgct
gcgccgctgtacgatcagcgcgaccgggtgatcggagacgcggcgcggctgatccgcgac
tgcgactgccgtcacggctgcccggcctgtatcggcccgatcctcgcgtccgacgaagag
cgcggcttctcgccgaaggcggcggcgctgacggtgctcgcgcagttcctggccgatgga
cctgaaacgccggcttga
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