Thioalkalivibrio nitratireducens: TVNIR_0205
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Entry
TVNIR_0205 CDS
T02408
Symbol
rpoH_[H]
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
tni
Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tni03021
]
TVNIR_0205 (rpoH_[H])
Transcription machinery [BR:
tni03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TVNIR_0205 (rpoH_[H])
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
UCR_14kD
SpoIIID
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
AGA31916
UniProt:
L0DUA7
LinkDB
All DBs
Position
complement(197577..198440)
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AA seq
287 aa
AA seq
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MSQALVRKPVDMPVPVGNLDHYIAAVSQIEVLDAEEEQRLARALRDRQDLDAARQLILHN
LRFVVHVARGYLGYGLPLGDLIQEGNVGLMKAVRRFDPEQGVRLVSFAVHWIRAEIHEFI
LRNWRIVKVATTKAQRKLFFNLRQAKRRLGWLNADEVTAVARDLGVSESDVLEMESRLSS
RDTSFDPAPEDDEDREHLVPAEHLAGSPEHDPAQVAEDADWNRHFQYRLRESLDALDART
RDILVRRYLSEPKATLHELAAEYGVSAERIRQIESRAFRSLREALAA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcactggtgcgcaagcccgtggacatgccggtcccggtaggcaacctggat
cactacatcgcggccgtgagccagatcgaggtcctcgacgcggaggaggagcagcgcctg
gcacgcgccctgcgcgaccggcaggatctggacgcggcacgccagctgatcctgcacaac
ctgcgtttcgtcgtccacgtggcccgcggctacctgggctacggcctgccgctgggcgac
ctgattcaggaaggcaacgtgggcttgatgaaggcggtgcgccgtttcgatcccgagcag
ggcgtgcggctggtctcgttcgcggtccactggattcgcgccgagatccatgaattcatc
ctgcgcaactggcggatcgtgaaagtagccacgaccaaggcccagcgcaagctgttcttc
aacctccgccaggccaagcggcgcctgggctggctgaatgcggacgaggtcaccgcggtc
gcccgggatcttggggtgtccgaaagcgacgtgctggagatggagagccggctgtcgagc
cgggataccagcttcgaccctgccccggaggacgacgaagaccgggaacacctggtaccg
gccgagcacctggcaggcagcccggagcacgatccggcccaggtcgcggaagatgccgac
tggaatcgccatttccagtaccgcctccgcgagtcgctggatgcgctggatgcacgcaca
cgtgacatcctggtgcggcgctacctgagcgaaccgaaggccacgctgcacgaactcgcg
gccgaatacggcgtgtccgccgagcgcattcgccagatcgaaagccgagcgttccgttcc
ctgcgtgaggcgctggcggcatag
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