Thioalkalivibrio nitratireducens: TVNIR_0228
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Entry
TVNIR_0228 CDS
T02408
Symbol
rimO_[H]
Name
(GenBank) Ribosomal protein S12p Asp88 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tni
Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tni03009
]
TVNIR_0228 (rimO_[H])
Enzymes [BR:
tni01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
TVNIR_0228 (rimO_[H])
Ribosome biogenesis [BR:
tni03009
]
Prokaryotic type
ribosomal protein modification factors
TVNIR_0228 (rimO_[H])
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
SIP
Motif
Other DBs
NCBI-ProteinID:
AGA31939
UniProt:
L0DQV3
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All DBs
Position
221243..222577
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AA seq
444 aa
AA seq
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MNKFDRLSTPQPQIGFVSLGCPKALVDSEQILSRLRAEGYGIVPDYDGADLVIVNTCGFI
DSAIAESLDAIGEAVAENGRVVVTGCLGKDAERIQQAHPGVLAVTGPRAFADVMAAVHEQ
LPPPHDPFASLVPPQGIRLTPRHYAYLKISEGCNHRCSFCIIPSLRGDLVSRPMGDVLGE
AERLAAAGVRELLVISQDTSAYGVDLRYRTGFFNGRPMRSDIEQLAAALGELGIWVRLHY
VYPYPHVDRLIPLIADGHLLPYLDMPLQHGHPRVLKAMRRPAATERVLERIRGWRERVPD
LALRSTFIVGFPGETDAEFEALLEFLEDAQLDRVGAFTYSAVDGAAANALAAPIPEAEKE
ARLEAFMQVQAGISAARLQRRIGTRQTVLVDGSDEDGTLIARSPAEAPEIDGVVYVEGAS
AALGDFLEVEIVDASEHDLFARVA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtttgaccgcctgtcaaccccccagccgcagatcggtttcgtgagcctcggg
tgcccgaaggcgctggtggattcggaacagattctgtcccgactgcgtgcggagggctac
gggatcgttcccgattacgacggtgccgacctggtgatcgtgaatacctgcggtttcatc
gacagcgcaatcgccgaatcgctggacgcgatcggggaggcggtggcggagaacggccga
gtggtggtcaccggctgcctgggcaaggacgcggagcggatccagcaggcccatccgggc
gtgctggccgtgaccggaccccgcgcctttgcggacgtgatggcggccgtgcacgaacaa
ttgccgccgccacacgatccgttcgcgagtctggtcccgccgcagggcatccgtctgacg
ccacgtcactatgcgtacctgaagatctccgagggctgcaaccaccggtgcagtttctgc
atcatcccgagtctgcggggagatctggttagccgcccgatgggcgacgtgctgggcgag
gcggagcggctcgctgctgccggagtccgggaactgctggtgatctcccaggatacgtcg
gcctacggtgtcgatctccgctatcgaaccggattcttcaacgggcggccgatgcggtcc
gacatcgagcagttggccgctgcgttgggagaactcgggatctgggtgcgactgcattac
gtctacccctacccgcatgtcgaccggctgattccgctgatcgccgacgggcatttgttg
ccctacctcgacatgccgctgcagcacggccatccgcgggtgctgaaggcgatgcgtcgc
ccggccgcgaccgagcgggtgctggagcgaatccggggatggcgagaacgggtgccggac
cttgcgctgcgttcgaccttcatcgtcggattccccggtgagaccgatgccgagttcgag
gcgttgctcgagttcctggaagacgctcaactcgaccgggtcggggccttcacctattcc
gcggtcgacggggccgcggcgaatgcactggccgccccgatccccgaggccgagaaggaa
gcgcgcctggaggcgttcatgcaggtgcaggccggcatcagtgccgcgcggctgcagcgc
aggatcggcacgcgccagacggtgttggtcgatggcagcgacgaggacgggacgctgatc
gcgcgctcgccggccgaggccccggagatcgacggtgtcgtctacgtggagggcgcgagt
gcggcactgggcgacttcctggaggtcgagatcgtcgacgcgtcggaacacgatctgttt
gcgcgcgtggcttga
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