Thioalkalivibrio nitratireducens: TVNIR_0336
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Entry
TVNIR_0336 CDS
T02408
Symbol
rsmE_[H]
Name
(GenBank) Ribosomal RNA small subunit methyltransferase E
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
tni
Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tni03009
]
TVNIR_0336 (rsmE_[H])
Enzymes [BR:
tni01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
TVNIR_0336 (rsmE_[H])
Ribosome biogenesis [BR:
tni03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
TVNIR_0336 (rsmE_[H])
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
Motif
Other DBs
NCBI-ProteinID:
AGA32044
UniProt:
L0DR37
LinkDB
All DBs
Position
complement(325152..325898)
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AA seq
248 aa
AA seq
DB search
MRCPRLLLDANLAPGRRVELPPDLLRHAVSVLRLRDGAPCQVFDGRGSEHHARLILSGRR
GGAVEIGAVAAAPTTPELPLRLLQGIARGDHMDLAIQKAVELGVGEIWPVLSARSRSAAA
HRGLERKGAHWHGVLRAAAEQCGRNELPRLDPPRDFAQALADLPREGLRVLADPEGVPAG
VWRCQEADASAGPVTLLVGPEGGLTSEERAQGRHAGFRGLRLGPRILRTETAAIAALTTL
QLLYGDLR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgcccccggctgctgctcgacgcgaacctggctcccggccgccgggtcgaactg
ccccccgatctgctgcgccacgcggtctcggtgctgcgcctgcgcgacggcgccccctgc
caggtcttcgacggtcgaggttcagagcaccatgcccgcctgatcctgtccgggcggcgc
ggtggggccgtggaaataggggcggtcgccgccgccccgaccactccggaactgccgctg
cggctgcttcagggcatcgcccgaggcgaccacatggacctcgcgatccagaaggcggtg
gaacttggcgtcggcgagatctggccagtgctcagcgcccgcagccgctcggccgccgca
caccggggcctggagcgcaagggggcacactggcacggcgtgctgcgcgccgcggccgag
cagtgcggccgcaacgagctgccgcggctcgacccgcccagagacttcgcgcaggcgttg
gcggacctgccgcgcgaaggcctgcgcgtgctggccgacccggaaggcgtccccgccggc
gtctggcgctgtcaggaggccgacgcgagcgccggaccggttacgctcctggtgggcccc
gagggcggcctgacctccgaggaacgcgcccaaggccggcatgccgggttccgcgggctg
cggctcggaccccggatcctgcgcaccgagaccgccgccatcgcggcgctgaccacactg
caactcctctacggcgacctccggtag
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