Thioalkalivibrio nitratireducens: TVNIR_0484
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Entry
TVNIR_0484 CDS
T02408
Symbol
groL_[H]
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TVNIR_0484 (groL_[H])
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tni03019
]
TVNIR_0484 (groL_[H])
03110 Chaperones and folding catalysts [BR:
tni03110
]
TVNIR_0484 (groL_[H])
03029 Mitochondrial biogenesis [BR:
tni03029
]
TVNIR_0484 (groL_[H])
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tni04147
]
TVNIR_0484 (groL_[H])
Enzymes [BR:
tni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
TVNIR_0484 (groL_[H])
Messenger RNA biogenesis [BR:
tni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
TVNIR_0484 (groL_[H])
Chaperones and folding catalysts [BR:
tni03110
]
Heat shock proteins
HSP60 / Chaperonin
TVNIR_0484 (groL_[H])
Mitochondrial biogenesis [BR:
tni03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
TVNIR_0484 (groL_[H])
Exosome [BR:
tni04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TVNIR_0484 (groL_[H])
Exosomal proteins of other body fluids (saliva and urine)
TVNIR_0484 (groL_[H])
Exosomal proteins of breast cancer cells
TVNIR_0484 (groL_[H])
Exosomal proteins of colorectal cancer cells
TVNIR_0484 (groL_[H])
Exosomal proteins of bladder cancer cells
TVNIR_0484 (groL_[H])
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
REF
Motif
Other DBs
NCBI-ProteinID:
AGA32186
UniProt:
L0DUZ6
LinkDB
All DBs
Position
463388..465049
Genome browser
AA seq
553 aa
AA seq
DB search
MSAKEVRFGNDARGRMVRGINILANAVKVTLGPKGRNVVLDKAFGAPTVTKDGVSVAKEI
ELEDKFENMGAQMVKEVSSQTSDVAGDGTTTATVLAQSIVHEGMKSVTAGMNPMDLKRGI
DKAVIAAVEELKNLSKPCTDSKAIAQVGTISANADESIGQIIADAMEKVGKEGVITVEEG
SSLENALDVVEGMQFDRGYLSPYFINNQQSMSAELDDCFVLLYDKKISNIRDLLPVLEGV
AKASKPLLIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGQV
ISEEVGLSLEKASIEDLGRAKKVQVTKENTTIIDGAGNPEDIKARVDQIRAQIEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALL
RSLGAMRDLKGANHDQDIGIAIARRAMEEPLRQIVMNCGEEPSVVLNKVLEGEGNYGYNA
ASGEYGDLIAMGILDPTKVTRTALQNAASVAGLIITTEAMVAELPKDEKGGGAGMDDMGG
MGGMGGMGGMGMM
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaaaagaagttcgtttcggcaatgacgcccgcggccggatggttcgcggtatc
aacatcctcgccaacgcggtcaaggtcaccctgggtcccaagggccgcaacgtggtgctc
gacaaggccttcggcgcccccaccgtcaccaaggacggcgtgtcggtcgcgaaggagatc
gaactcgaggacaagttcgagaacatgggcgcgcagatggtgaaggaggtttcctcccag
acttccgacgtcgccggcgacggcaccaccaccgcgaccgtgctggcccagtccatcgtg
cacgaaggcatgaagtcggtgactgcgggcatgaacccgatggacctgaagcgcggcatc
gacaaggccgtgatcgctgcggtcgaagaactgaagaacctctccaagccctgcaccgac
agcaaggcgatcgcccaggtcggcaccatctccgccaacgccgacgagtcgatcggtcag
atcatcgccgatgcgatggagaaggtcggtaaggagggcgtgatcacggtcgaggaaggt
tcttcgctcgagaacgcgctcgacgtggtcgaggggatgcagttcgaccgaggctacttg
tcgccgtacttcatcaacaaccagcagagcatgagcgccgagctcgatgactgcttcgtg
ctgctctacgacaagaaaatctccaatatccgcgacctgttgcccgttctagaaggtgtc
gcgaaggccagcaaaccgctgctgatcgtcgccgaggacgtcgaaggcgaggcgctcgcg
acgctggtcgtgaacaccatgcgtggaatcgtcaaggtcgccgcagtcaaggctcccggc
ttcggagaccgccgcaaggcgatgctgcaggatatcgcggtgctgactggcggccaggtg
atttccgaggaggtcggcctgtcgctggagaaggccagcatcgaggatctggggcgtgcg
aagaaggtgcaggtcacgaaggagaacaccacgatcatcgacggtgcgggcaaccccgag
gacatcaaggcccgggtcgaccagatccgggcccagatcgaggaagcgacctcggactat
gacaaggaaaagctgcaggagcgggtcgcgaagctcgccggtggcgtggctgtgatcaag
gtcggagcggccaccgaagtcgagatgaaagagaaaaaggcccgcgtcgaagacgcgctg
cacgcgacgcgcgccgcggtggaagaaggcgtggttccgggcggcggtgtcgcgctgctg
cgctcgctgggcgcgatgcgcgatctcaagggagccaaccacgatcaggacatcggcatc
gcgatcgcgcgtcgtgcgatggaggagccgctgcgccagatcgtgatgaactgcggcgag
gaaccctccgtggtcctgaacaaggtgctcgaaggggaggggaactatggctacaacgcc
gcttccggcgagtatggcgacctgattgcaatgggcatccttgatccgaccaaggtcacc
cggaccgcgctgcagaacgcagcctcggtggccggcctgatcatcaccaccgaggcgatg
gtcgccgaactcccgaaggatgagaagggtggcggtgccggcatggacgacatgggcggc
atgggtggcatgggcggcatgggcggcatgggcatgatgtag
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