Thioalkalivibrio nitratireducens: TVNIR_0828
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Entry
TVNIR_0828 CDS
T02408
Symbol
rnc_[H]
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TVNIR_0828 (rnc_[H])
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tni03019
]
TVNIR_0828 (rnc_[H])
03009 Ribosome biogenesis [BR:
tni03009
]
TVNIR_0828 (rnc_[H])
03036 Chromosome and associated proteins [BR:
tni03036
]
TVNIR_0828 (rnc_[H])
Enzymes [BR:
tni01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
TVNIR_0828 (rnc_[H])
Messenger RNA biogenesis [BR:
tni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TVNIR_0828 (rnc_[H])
Ribosome biogenesis [BR:
tni03009
]
Eukaryotic type
90S particles
RNase
TVNIR_0828 (rnc_[H])
Prokaryotic type
rRNA processing factors
TVNIR_0828 (rnc_[H])
Chromosome and associated proteins [BR:
tni03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
TVNIR_0828 (rnc_[H])
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Dicer_dimer
Motif
Other DBs
NCBI-ProteinID:
AGA32518
UniProt:
L0DU22
LinkDB
All DBs
Position
747853..748584
Genome browser
AA seq
243 aa
AA seq
DB search
MPLSRAESRSHARPAAAIGAGDFRSLLPEALRAGDALEQALTHRSAGSRHNERMEFLGDA
VLGLVIADALYERLPDAPEGDLTRLRAALVNRTALAELARGAGLEGALTLGQGERKSGGQ
RRESILADTLEALIGATYHAAGFEAARAFVLRLYAERLAHLPSAESLKDPKTRLQEWLQG
RGEALPEYRVLEVSGPDHRRQFVVEVWLPSQSWGQRGAGSGRRRAEQAAAEAALDRLRRE
PLR
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgccactgtcccgggctgagtctcgatcacacgcgcgccctgcagcagcgatcggtgcg
ggcgattttcgcagcctgcttccagaggcgctgcgtgcgggtgacgccctggagcaggcg
ttgacccaccgcagcgccggtagtcgtcacaacgagcgcatggagttcctcggcgacgcg
gtgttgggtctggtgatcgccgatgccttgtacgaacgcctgcccgacgccccggaaggg
gacctgacacgcctgcgcgcggcgctggtcaaccggacagcgctcgcggaactcgcgcgc
ggtgccggtctggagggggcgctgacgctcgggcaaggggagcgcaaaagtggcggccag
cgccgcgaatcgatcctcgccgacacgctcgaggcgctgatcggtgccacctaccatgcc
gcgggcttcgaggcagcccgcgcgttcgtgctgcggctctatgccgagcggctggcccac
ctgccgagcgccgagtccctgaaggatccgaagacccgcctgcaggagtggctgcagggg
cgtggcgaggccctgcccgaataccgggtgctggaggtgtccggtccggatcaccggcgc
cagttcgtggtcgaggtctggctgccgagccagtcttggggacagcgcggcgccggttcc
ggccgacgccgggccgagcaggcggcggccgaggcggcgctggaccggctgcggcgggaa
ccgctgcgatga
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integrated database retrieval system
