Thioalkalivibrio nitratireducens: TVNIR_0881
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Entry
TVNIR_0881 CDS
T02408
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni00061
Fatty acid biosynthesis
tni00071
Fatty acid degradation
tni01100
Metabolic pathways
tni01212
Fatty acid metabolism
tni02024
Quorum sensing
tni04146
Peroxisome
Module
tni_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TVNIR_0881
00071 Fatty acid degradation
TVNIR_0881
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TVNIR_0881
09145 Cellular community - prokaryotes
02024 Quorum sensing
TVNIR_0881
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tni01004
]
TVNIR_0881
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tni04147
]
TVNIR_0881
Enzymes [BR:
tni01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TVNIR_0881
Lipid biosynthesis proteins [BR:
tni01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TVNIR_0881
Exosome [BR:
tni04147
]
Exosomal proteins
Exosomal proteins of breast milk
TVNIR_0881
Exosomal proteins of breast cancer cells
TVNIR_0881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AGA32571
UniProt:
L0DW44
LinkDB
All DBs
Position
complement(793493..795370)
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AA seq
625 aa
AA seq
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MGASSRERRRHPAPDSDHRSTMTTTVITPERAGSLAGLFRERVEASPHKVAYRQFDAARG
SWTRSTWAEMACEVGRWQMALKREGLEPGDRVAMMLRNCREWITFDQAALGLGLVTVPLY
TDDRPDNVAYIVEQAGVKLLLLEDRTQWQRLLPVRDRLQTVTTIVSLRGFDDDSVPGDPR
LTAAADWLFGLEGDLVTRLEEPDSLATIVYTSGTTGRPKGVMLSHRALLFNAHAASRCAP
LGGEDVFLSFLPLSHTLERTAGCFLPMVVGAEVVFARSIPQLAEDLRVVQPTVLVSVPRI
YESVYAKIQAGLKQKSALARLLFRTTVDAGWARFEHIQQRAGWSPRLLLWPLLGRLVAHK
VLERLGGRLEYAVCGGAPLPPSIARFFIGLGLPVYHGYGLTEASPVVTVNRPDENLPASI
GKPLPGVEIRIGEQDELLTRSPSVMLGYWRDDEATAATIDPDGWLHTGDKARIDAQGFVF
ITGRIKDIIVLGNGEKVPPADMEMSIQLDPLFDQVLVIGEGRAFLSALVVLDAAAWREYA
RELDVNPDGDDDLRSRFVERSLLARVQAQLKDFPGYARIRRLTALREPWTIDDGLLTPTL
KMKRERILARHRDDVERMYADYAES
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcctccagccgcgaacggcggagacacccggcacccgacagcgaccacaggagc
accatgaccacgaccgtgatcacgccggagcgcgcgggcagcctggcggggctgttccgg
gaacgcgtcgaggccagcccgcacaaggtggcctaccggcagttcgacgcagcccggggc
tcctggacgcgaagcacctgggccgaaatggcgtgcgaagtcgggcgctggcagatggcc
ctgaaacgcgagggactggaacccggcgaccgggtggcgatgatgctgcgcaactgtcgc
gaatggatcacgttcgaccaggcagcgctggggctgggcctggtcacggttccgctgtac
accgacgatcgtccggacaatgtcgcctatatcgtcgagcaggccggggtgaagctcctg
ctgctggaggacaggacgcaatggcaacggctgctgccggtgcgggaccggctacagacg
gtcaccacaatcgtctcgctgcgcggtttcgatgacgacagcgtccccggggacccccgc
ctgacagccgctgccgactggctgttcggactcgaaggtgacctcgtcacgcggctggag
gaaccggacagcctcgccacgatcgtctatacctcgggaaccaccgggcgcccgaagggc
gtgatgctgtcccaccgcgcgctgctgttcaatgcgcacgcggcttcccggtgcgcgccc
ctggggggcgaagacgtcttcctctcgttcctgccgctgtcacatacgttggaacgcacc
gcggggtgtttcctgcccatggtcgtcggcgcggaggtggtgtttgcgcgctcgatcccg
cagctcgccgaagacctgcgggtcgtgcagccgacggtgctggtgtccgtgccgcgcatc
tacgagagcgtctacgcgaagatccaggccggcctgaagcagaaatcggctctggcccgg
ctcctgttccgaaccacggtcgatgccggatgggcgcgattcgaacacatccagcaacgt
gccggctggtcgccccgcctgctgctttggccgttgctcgggcgcctggtcgcgcacaag
gtactggaacgcctgggcgggcgcctggagtacgccgtctgcggcggtgcgccgctgccc
ccgtccatcgctcgcttcttcatcggactggggctgccggtgtaccacggctacggactc
accgaggccagcccggtggtcacggtgaaccgtcccgatgaaaacctgcccgcgtcgatc
ggcaagccgctgccgggcgtcgagatccggatcggcgagcaggacgaactgctcacccgc
agtcccagcgtgatgctcggctactggcgggacgacgaggccaccgcagccacgatcgac
cccgacggctggctgcataccggcgacaaggcgcggatcgacgcacagggcttcgtgttc
attaccgggcgcatcaaggacatcatcgtgctcggcaacggcgaaaaggtgccgcccgcc
gacatggaaatgtccatccagctcgacccgctgttcgaccaggtactggtgatcggcgag
gggcgtgcgttcctgtccgcgctggtggtgctcgatgccgccgcctggcgcgagtacgca
cgcgagctcgacgtgaacccggacggtgacgacgaccttcgcagccgtttcgtcgaacgc
agtctgctggcacgcgtgcaggcacagctcaaggactttcccggctatgcgcggatccgg
cggctgacggcattgcgcgagccctggacgatcgacgatggcctgctgacccccacgctg
aagatgaagcgcgaacgcattctggcccgccaccgggacgacgtggagcggatgtacgcg
gactacgcggaaagctga
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