KEGG   Thioalkalivibrio nitratireducens: TVNIR_1050
Entry
TVNIR_1050        CDS       T02408                                 
Name
(GenBank) Type I restriction-modification system, restriction subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tni  Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:tni00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tni02048]
    TVNIR_1050
Enzymes [BR:tni01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     TVNIR_1050
Prokaryotic defense system [BR:tni02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   TVNIR_1050
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD RsmF-B_ferredox
Other DBs
NCBI-ProteinID: AGA32734
UniProt: L0DSZ7
LinkDB
Position
972991..976188
AA seq 1065 aa
MMADSREARFQQDIIDAMTADGWLTAPASGYDAADALYTEDLVAYLQEAWPQRWEKFAAK
NPQDPQKALVRAVTRELERGGTLEVLRHGVKTPGVKLELCSFRPDHEMNPESVARYRANR
LRVVPEVSYSPHARSGEYNPRLDLVLFVNGIPTATLELKSEFKQSVENAKRQYRLDRPVK
DPVTRKLEPLLTFRRGALVHFAVSQDEVAMTTRLNGKDTVFLPFNQGTEDGGAGNPTPPD
RDSYATGYLWQRVFQPDAWLRITGRFLHLEQKTEEDFHGKRRKKEALIFPRFHQWDVVNR
LIEATREEGAGQRYLIQHSAGSGKSNSIAWIAHQLAALYDDAGGKLFNSVVVVTDRTVLD
SQLQDTIYQFDHAHGVVRPITRDVGSQSKSEQLAGALAEQTRIIIVTIQTFPALFDALDR
RPDLAAGRYAVIADEAHSSQTGSSATKLKAILGTDMPEDEEISAEELLDAAVAARKPAER
ISYYAFTATPKAKTLELFGRPPNPERPASKDNKPEPFHLYSMRQAIEEGFILDVLKNYTT
YSTAWKLAHPHGDDQEVESRKASTRIARWVRLHPYNIAQRVEVIVEHFRANVRHLLDGQA
KAMVVTGSRQEAVRYMLAMREYIQDRGYPGIHALVAFSGTVLPDDVIPEEVTETSALLNP
GLKGRDLAEAFDTAEFNVMIVANKFQTGFDQPRLCAMYVDKKLQGVDCVQTLSRLNRIFP
GKENTFVLDFFNDAEDVLAAFRPYYNKAELADVSDPNVVYDLQKSLDAAGIYHWDEVENF
ARAFFDPKAGASQLSYYCQPAKERYTTRYKAVLERIQAWKAAQALAERNGDKAGLHRAEQ
ELKDAHTTRDELDLFRKNLQSFVRSYEFLSQIVDFDDRELEQLCVYARALHPLLRIENLE
EDPIDVDELELTHYRLNKRAEHRLNLAEEGGDYSGLKPVTDVGSGKPHDPEKKRLSEIID
QLNELFGAEVSDADKLQFANGIADRIRRDDAVMAQVENHSPDQVMHGLFPKRVTDTVLDA
MTDHEKLSMQVLDSPEHQRDFALLILRLLTAGAGEQRNPATRTGP
NT seq 3198 nt   +upstreamnt  +downstreamnt
atgatggcggacagcagggaagcccggtttcagcaggacatcatcgacgcgatgaccgcc
gatggctggttgaccgctccggccagcggctatgacgccgccgatgcgctgtacaccgag
gatctcgtcgcctacctgcaggaggcgtggccgcagcgctgggagaagttcgccgccaag
aacccgcaggatccgcagaaggccctggtgcgcgcggtcacgcgcgagctggagcgtggc
ggcacgctggaggtgctgcgccacggggtgaagacgccgggggtgaagctggaactgtgc
agcttccggcccgaccacgagatgaaccccgagtccgtggcgcgctaccgtgccaaccgc
ctgcgggtggtgccggaggtctcgtactcgccgcatgcgcgcagcggcgagtacaacccg
cggctggatctggtgctgttcgtcaacggcatccccaccgccacgctggagctgaagagc
gagttcaagcagtcggtggagaacgcgaagcgccagtaccggctcgaccgcccggtgaag
gatccggtcacccgcaagctggaaccgctgctgaccttcaggcgcggggcgctggtgcac
tttgcggtcagccaggacgaggtggcgatgaccacccgcctgaacggcaaggatacggtc
tttctgccgttcaaccagggcaccgaggacggcggcgccggcaaccccacaccaccggac
cgggacagctacgcgaccggctacctgtggcagcgcgtgttccagccggatgcctggctc
cggatcaccggccgctttctgcatttggagcagaagaccgaggaggacttccacggcaag
cgccgcaagaaggaggcattgatcttcccgcgcttccaccagtgggacgtggtgaaccgc
ctgatcgaggcgacgcgcgaggaaggcgcggggcagcgctacctgatccagcacagcgcc
ggttccggcaagtccaactccatcgcctggatcgcgcaccagctcgccgcgctgtacgac
gacgcgggcggcaagctgttcaactcggtggtggtcgtcaccgaccgcacggtgctggac
agccagctccaggacacgatctaccagttcgaccacgcccacggcgtggtgcggccgatc
acccgcgatgtcggcagccagagtaagtcggagcaactggccggggcgctggccgagcag
acgcgcatcattatcgtgaccatccagaccttcccggcgctgttcgacgcgctggacagg
cgccctgacctggccgccgggcgctacgcggtgatcgccgacgaggcgcattcctcgcag
accggctcctccgccaccaagctgaaagcgatcctcggcaccgacatgccggaggacgag
gagatcagcgccgaggagctgcttgacgcagccgtggccgcgcgcaagccggccgagcgc
atcagctactacgcctttaccgccacgcccaaggcgaagacgctggagctgttcggccgc
ccgccgaacccggagcggccggcatcaaaggacaacaagcccgagccgttccacctgtac
tccatgcgtcaggcgatcgaggaaggcttcatcctcgacgtattgaagaactacactacg
tactcgaccgcctggaagctggcgcacccgcacggcgacgaccaggaggtcgagtcgcgc
aaggcgtcgaccaggatcgcccgctgggtgcgcctgcacccgtacaacatcgcgcaaagg
gtcgaggtgatcgtcgagcacttccgcgccaacgtgcgccatctgctggacggccaggcg
aaggcgatggtggtgaccggcagccgccaggaggcggtgcgctacatgctggcgatgcgc
gagtacattcaggaccggggctacccgggcatccacgcgctggttgccttctccggcacc
gtactgccggacgacgtgatccccgaggaggtgaccgagaccagcgcgctgttgaacccg
gggctgaagggccgcgacctggccgaggcgttcgataccgccgaattcaacgtgatgatc
gtcgccaacaagttccagaccgggttcgaccagcccaggctctgcgcgatgtacgtggac
aagaaactccagggcgtcgactgcgtgcagaccctctcgcgcctgaaccgcatctttccg
ggcaaggagaataccttcgtcctcgacttcttcaacgacgcagaagacgttctcgcggcc
ttccgcccgtactacaacaaggccgagctggccgatgtctccgaccccaatgtcgtgtac
gacctgcagaagagcctcgacgccgccggcatctaccactgggacgaggtcgagaacttc
gcgcgcgccttcttcgatccaaaggccggcgccagccaactcagctactactgccagccg
gcaaaggaacgctatacgacccggtacaaggccgtgctggaacggatccaggcctggaag
gccgcgcaggcgctcgccgagcgcaacggcgacaaggccggcctccaccgcgccgaacag
gagctgaaggacgcccacaccacccgagacgagctcgacctgtttcggaagaacctgcag
agcttcgtgcgcagctacgagttcctgtcacagatcgtcgacttcgacgaccgcgagctg
gaacagctctgcgtgtacgcccgtgcgctgcacccgctgctgcgcatcgagaacctggaa
gaagacccgatcgacgtcgacgaactcgagctgacccactaccggctgaacaagcgcgcc
gaacatcgtctgaatctggcggaggagggcggagactacagcgggctgaagcccgtcacc
gacgtcggttccggcaagccccacgacccggaaaagaaacgcctttccgagatcatcgac
cagctcaacgaactgttcggcgccgaagtcagcgacgcagacaagctccagttcgccaac
ggcatcgccgaccgcatccgccgcgacgacgccgtgatggcccaggtcgagaaccacagc
ccggaccaggtgatgcatggcctgttcccgaaacgcgttaccgacaccgtgctcgacgcg
atgaccgaccacgaaaaactctcgatgcaggtgctggacagtcccgaacatcagcgcgac
ttcgcgctactgatcctgcgcctgctgaccgccggggccggcgagcaacgcaaccccgcc
acgaggaccggcccctga

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