Thioalkalivibrio nitratireducens: TVNIR_1115
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Entry
TVNIR_1115 CDS
T02408
Name
(GenBank) Glycogen debranching enzyme
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni00500
Starch and sucrose metabolism
tni01100
Metabolic pathways
tni01110
Biosynthesis of secondary metabolites
Module
tni_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
TVNIR_1115
Enzymes [BR:
tni01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
TVNIR_1115
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GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
hDGE_amylase
DUF3459
Motif
Other DBs
NCBI-ProteinID:
AGA32794
UniProt:
L0DT59
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Position
complement(1045726..1047945)
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AA seq
739 aa
AA seq
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MHRFLVVRDSVRPMSRPVAGPDREGTMKRDSSVSKPLAAVPLPGEPYPLGAAFDGKGTNF
SLYSEVAERVELCLFDANGRQTAAHDLTEVTALCWHGYLPEVGPGQRYGYRVYGPWDPDR
GHRCNPAKLLLDPYAKAVDGQVRWNEAVFPYPFDDPEGSVNEDDSAAFVPKSVVIDPAFD
WEDDRHPCTPWHETVIYETHVKGFTARHPDVPEALRGTYAGLAHPAAVEYLTRLGITAVE
LMPVHQFIHYAFLEERGLRNYWGYSSIAYLAPHNEYAASGADGGQVQEFRNMVKTLHRAG
LEVILDVVYNHTSEGNHLGPMLSLKGIDNAAYYRLIADNPRHYLDYTGTGNSLNMRHPHV
LQLIMDSLRYWVLEMHVDGFRFDLAATLARELHEVDRLSAFFDVIQQDPVISQVKLIAEP
WDLGEGGYQVGNFPPLWSEWNGKYRDTVRDFWRGEDQTLGEFAYRLTGSSDLYESSARRP
HASINFVTAHDGFTLRDLVSYNEKHNEANGEDNRDGADYNRSWNCGAEGPTEDPEINALR
RRQQRNFLVTLLLSQGVPMLLGGDEIGRTQQGNNNAYCQDNEVAWYDWEQVDEDLLAFTR
RLIRLRLEHPVFRRRRWFQGRAIHGDTVKDIAWFKPDGEQMAEEHWGEGFAKSLGVFING
RSLTAPGPHGERIVDDRFFLIFNAHDDPLDFVLPGPEWADIWILELNTDTGWVEAEETVP
AGATLRAAARSVTVLHCVC
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcttcctggtggtccgcgattccgtgcgtccgatgtcacgcccggttgccggg
ccggatcgcgagggcacgatgaagcgggattccagtgtgagcaaaccgttagcagcggtg
ccgttgccgggtgagccctacccgctcggggccgcgttcgatggcaagggcacgaacttc
tcgctgtactcggaggtcgcggagcgcgttgagctctgcctgttcgacgcgaacggcagg
cagaccgccgcgcacgatctgaccgaggtcaccgcgctgtgctggcacggctacctgccg
gaggtcgggccggggcagcgttacggctaccgggtatacggcccctgggatccggaccgc
ggccaccgctgcaacccggcgaagctgctgctcgatccctacgccaaggcggtcgacggc
caggtgcgctggaacgaagcggtgtttccctaccccttcgacgatcccgaggggtcggtg
aacgaggacgacagcgcggcgttcgtgccgaagtcggtcgtgatcgaccccgcgttcgac
tgggaggacgaccgccatccctgcaccccctggcacgagacggtgatctacgagacgcat
gtgaaaggcttcaccgcgcgtcacccggacgtgcccgaggccctgcgcggaacctatgcc
gggctcgcccacccggccgcggtcgagtacctgacccggctcgggatcaccgcggtcgag
ctgatgccggtgcaccagttcatccactacgcgttcctggaggagcgcgggctgcgcaat
tactggggttacagcagcatcgcctatctcgcgccgcacaacgagtacgccgccagcggc
gcggacggcggccaggtgcaggagttccggaacatggtgaagacgctgcatcgggccggc
ctcgaggtgatcctggacgtggtgtacaaccacaccagcgagggcaaccacctcggcccg
atgctgagcctgaagggcatcgacaacgcggcctactaccgcctgattgccgacaacccg
cgccattacctggactacaccggcaccggcaacagcctgaacatgcgccacccgcacgtg
ctgcagctgatcatggactcgctgcgctactgggtgctggagatgcacgtcgacggcttc
cgctttgatctcgccgcgacgctggcgcgcgagttgcacgaggtggaccggctctccgcg
ttcttcgacgtcatccagcaggatccggtgatcagccaggtgaagctgatcgccgagccc
tgggatctcggcgagggcggctaccaggtcggcaacttcccaccgctgtggtccgagtgg
aacgggaagtaccgcgacacggtgcgcgatttctggcgcggcgaggaccagacgctcggg
gagttcgcctaccgcctgaccggcagctccgacctctacgaatcgtcggcacggcgcccg
cacgcgagcatcaacttcgtcaccgcgcacgacggcttcacattgcgcgacctggtgtcc
tacaacgagaagcacaacgaggccaacggcgaggacaaccgcgacggcgcggactacaac
cgctcgtggaactgcggcgccgaagggccgaccgaagaccccgagatcaacgccctgcgc
cgcaggcagcagcgcaacttcctggtcacgttgctgctgtcccaaggcgtacccatgctg
ctcggcggcgacgagatcgggcgtacccagcagggcaacaacaacgcctactgccaggac
aacgaggtcgcgtggtacgactgggagcaggtcgacgaggacctgctggcgttcacccgc
cggctgatccggctgcggctggagcacccggtgttccggcgccggcgctggttccagggc
cgcgcgattcatggcgacacggtcaaggacatcgcctggttcaagccggacggggagcag
atggcggaggaacactggggagagggtttcgcgaaatcgctcggcgtgttcatcaacggc
cgttcgctgaccgcccccggtccgcacggcgagcggatcgtcgacgaccgcttcttcctg
atcttcaacgcccacgatgacccgctcgacttcgtgcttccggggcccgagtgggcggac
atctggatccttgaactgaacacggacaccggttgggtcgaagccgaggagaccgtgccg
gccggggcaacgctgcgggccgcggcacgctcggtaacggtgctgcactgtgtctgctga
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