Thioalkalivibrio nitratireducens: TVNIR_1116
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Entry
TVNIR_1116 CDS
T02408
Symbol
wapA_[H]
Name
(GenBank) YD repeat protein
Organism
tni
Thioalkalivibrio nitratireducens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TEN_YD-shell
RHS_repeat
TTR_TEN1-4
TEN_NHL
FN-plug_TEN1-4
CarboxypepD_reg
NHL
Big_13
Vgb_lyase
Glucodextran_B
Big_6
Big_3_2
Phytase-like
CooC_C
Motif
Other DBs
NCBI-ProteinID:
AGA32795
UniProt:
L0DUX3
LinkDB
All DBs
Position
complement(1049220..1056407)
Genome browser
AA seq
2395 aa
AA seq
DB search
MHLDLAIDEASGDIWLARLGSLTVFDWRGVQLLHHPLAQPLRAMALDSGRRTAWVAGPDR
LSAWTLQGEPAGEVLLGEGFDARTIAFDASLDAVWVGGAGGLRRYAIDGTLQFTQEGSDI
RLITADQAGALWATDGTWLWLLDASGHEHFALQPLYGTETVLALAVDPADGSAWVAGAST
LQRISAHGDWSVSLDLRTHPSFRGRVWALSAYADVTPPEIAIVAPAENSFENTARPPIVL
RYSDVGSGVDPDSLALTVDHKNLPASCAHAADGAECVPESTVHEGGVTLRAVVADRAGNV
SAFAERRFTVDTIPPVITLTSPEPGGFTNQVQTRLHGLVSEPVELTIEGEAVALGLEHRF
DHPVELVEGPNTLSFVAVDRAGNVGELQATIVLDTVPPLPVEADQVRVGDVSAGQVSVTG
GVGSAEADARIHLQNTHTGAVASSPVAADGSFALIVDASPGESLELVVVDRAENRSTPVV
LDVPGVTGIDQGLLPPDPATVAPALDEGGVPELLAATAFLYTGDNPIQRGVVPGTITEHR
AAVLRGRVTARDGQPLAGVRITVKDHDDLGHTLSRLDGSFDMAVNGGGHLAVRYDKPGYL
PVQRQVRVPWLDYVWAPDVVLIPLDPAVSSIDLAADVPVQAARGSVVSDTDGTRQATILF
PQGTTAELRFADGSSQPITRMSVRATEYTVGESGAAAMPGELPPTSGYTYAVELSVDEAM
TAGATEVRFDRPVPVYVENFLDFPVGGIVPAGWYDRDKAAWIASDNGRIIRVLSVEGGAA
VLDVTGSGAAATESELAALAIDAHERRALADLYAPGQSLWRVPTEHFTPWDYNWPYGPPP
DAEPPRVPEPEIDEREDEPDCRSGSIIECQNQVLGQSVPVAGTPFSLNYRSDRVPGRQAA
RSLRIPLSGSQVPASLQRIDLQIEVAGRRFHQSFAGHPNQVHTFVWDGKDAFGRELPSAQ
TATVRVGYVYRAVYYAPANFSRSFAATGLGILSGDRRRHEITLWRESRPMLGAVDARVLG
LGGWSLNAHHMYSAPDAVLYKGDGTRRSAKDVGALITTVAGNGNGTNTGDGGPALEAGIN
GPYDVAIAPDGSIFLAAGDRVRKVDVRGVISTVPGTAGNSGILNVAVDAGGSVFFTRRNG
GPRIFRANPDGTVHHVAGNGSRTFAGDGGPAVNASFIDPRGIAVGADGSLYVGDFRTHRV
RRIGPDGIIRTVAGNGGSGIGGIGGPAVQARIDRTYDVAVGPEGDLYIDSHNYTVFRVGP
DGIIHRAAGRVCNGFSGDGGDATLACMGRVSAVTAASDGTIAIADIIDNRRIRLVTPDGI
IRTVAGTGQSGFTGDGGPAERATIGGTEISFGPDGSLYLADSSNRRVRRIASSLGGTLGG
ARMVASRDGSEHYVFDHTGRHLRTVDNVTGALRYVFGYDVRGLLVQIEDGDGNRTRIERD
ATGDVVAIVGPDGQRTVVSVGAHGYLASVTNPMGESSHFAYRARGLLTGLTDPRGFQSAY
TYDALGRLAGTGDPAGGGWNITRGAIANGYEVGMTSAEGRATRYRVEQTPTGNRMRENLL
PDGTRETLALNTAGRRIFTAADGTLAEILEGPDPRFGMSSPVPSSVTLRTPSGRVQQTTT
QRTAMLGQAGDPLSHSELVEIVTSNGRMTQARFSAADRVWFITSPQGRQRSIELDARSRI
RRDTIAGLAPVAYERDARGRLTRMIQGAAGDRVHALSYNESGQVATVSDPLSRTRGYAYD
SAGRIVRETLPDGREIGYVYDPAGNPAALVPPGREAHLFEYTPVNLEQRYLPPALPGVDT
ITRYQYNRDRQLTAIERPDGQALRFFYDAGGRPDSLRVSTGEYRFGFHPETGQLASIDSP
TGIDLAYSWDGFLPLSETWAGTVNGSVSQSYDHNFWVTQRSVNGQGIAYQHDSDGLLIGA
GDLSLARDPGNGRVIGSSLGLVSTALDYNAFGEIVSIRAAGATGVLAEFGYSRDAVGRVI
EETALIEGGLTRTSYSYDVAGRLATVSRDGTAVTYTYDANGNRTHVNGLQTAVYDGQDRM
LAYGQAQFEYSENGELASRTDGGVQTRYVYDEVGNLQQVHLPGDLRIEYLTDGRNRRVGK
RVNGALVQGFLYRDQLNPIAELDGSGQVVSRFVYAEHAHVPDYMIRDDATYRILSDQLGS
PRLVVNVGTGEVVQRIDYDAWGNVLQDTNPGFQPFGFAGGLLDQHTNLVRFGARDYDPST
GRWTAKDPIRFAGGDPNLYGYVLNDPLNWLDPHGLWSVSLNAFAGIGGGVIFGRNDTGTW
FMGGQLGVGIGGGGALDPFDQGPTGGARTDGPYGAACSTLKPPSTGFSAGGSIGIGGSFG
GSNFTYGGGGGYNFDGTGSSYGGQVGLNSSLNPIHRRGLGLSAGAAGVINVIGWW
NT seq
7188 nt
NT seq
+upstream
nt +downstream
nt
gtgcacctcgatctggcgatcgacgaggccagtggcgacatctggctggcgcgtcttggc
agcttgacggtctttgactggcggggtgtccagttgctccaccacccgctggcgcaacct
ctgcgtgccatggcgctggattccgggcgaaggactgcgtgggtcgcaggccccgacagg
ctcagtgcctggacgctgcagggagagcctgcgggagaggtgcttctgggcgaaggattc
gatgcccgcacgatcgcattcgatgccagcctggacgctgtctgggtgggcggcgcaggg
ggtcttcgccgctatgcgatcgacggcacgttgcagttcacgcaggagggcagcgacatc
cggcttatcacagccgaccaggcgggggccctttgggcaacggatgggacctggctgtgg
ttgctggatgcctcgggccacgagcatttcgccctgcagcccctgtacggtacggaaacg
gtgctggcgctggcggtcgatccggcggatgggtcggcctgggtcgcgggtgcctccacg
ctgcagcggatctcggcccatggtgactggagcgtcagcctggatctgcgtacacatccg
tcctttcggggccgtgtttgggcattgtccgcttatgcggacgtgacccctcccgaaatc
gcgatcgtcgcgcctgcagaaaacagcttcgagaacaccgcgagaccgccgatcgtgctg
cggtacagcgacgtgggatccggggtcgacccggactcgcttgcgcttacggtggaccac
aagaatctcccggcctcctgtgcgcacgccgccgacggcgcggagtgcgtccctgagtcg
accgttcacgaagggggggtgacgctgcgggcggtggttgcggaccgtgccggcaacgtc
tccgcgttcgcggagcgccggttcacggtcgacaccatcccgccggtgatcacactgacg
tcgccagagccgggtggcttcaccaatcaggtgcagacccggctgcatgggctggtcagc
gaaccggtggaactgacgatcgaaggcgaggccgtggcgctggggctggagcaccgcttt
gatcacccggtggagctggtcgaaggcccgaacacattgtccttcgtggcggtcgaccgc
gccgggaacgtcggcgaactgcaggccacgatcgtcctcgatacggtgcccccgcttccg
gtggaggccgatcaggtccgggtcggcgatgtcagcgctggccaggtctccgtgaccggc
ggcgtgggcagtgccgaggcggacgcgcggattcatctgcagaacacgcacaccggcgct
gtggccagcagtccagtcgccgccgacggtagcttcgcgctgatcgttgacgcctcaccg
ggtgagagccttgaactcgtcgtggtcgaccgtgccgagaaccgcagcacacccgtcgtg
ctagatgtacccggtgtaaccggcatagaccaaggccttctgccgccggatccggccacg
gtcgccccggctttggatgaaggcggcgttccggagctgctggccgcgaccgccttcctc
tacaccggggacaatcccattcagcgcggagtggtgcccggaacgatcaccgagcatcgt
gcggccgtgctgcgcggcagagtgaccgcgcgggacgggcagccgctcgccggggtgcgc
atcacggtgaaggaccacgatgacctcggccacaccctcagccggctggacggcagcttc
gacatggccgtgaacggtggaggccatctcgcggtgcgatatgacaagccgggctatctt
ccggtccagaggcaggtccgggtgccctggctggactacgtctgggcacccgacgtggtg
ctgatccctctcgacccggccgtcagcagcatcgatctcgcggccgatgtaccggtccag
gccgcccgcggcagcgtggtgagcgacaccgacggcacgcggcaggccacgatcctgttt
ccgcaggggaccacagcggagctgcggtttgccgacggcagctcgcagcccatcacgcgc
atgagtgttcgcgcaacagagtacacggtgggggagagcggagccgcggccatgcccgga
gagctgccgcccacatcgggttatacctatgccgtggaactctcggtggacgaggcgatg
acggcgggagccactgaggttcgcttcgaccgaccggtcccggtgtacgtggaaaacttc
ctcgacttcccggtgggcgggatcgtgcccgctggctggtacgaccgtgacaaggcggcg
tggatcgcatccgacaacggccggatcattcgggtgctctcggtcgaaggcggagcggcg
gtgctggacgtgaccggttccggtgccgccgccaccgagtctgagcttgcggcgctcgca
atcgacgcgcacgagcgccgcgcgctcgccgatctctatgccccagggcagagtctctgg
cgcgtgccgaccgagcacttcaccccctgggactataattggccctatggcccacctccg
gatgcagagccgccccgggtgcccgaaccggagatcgacgagcgggaagatgagccggac
tgccgcagtggttcaatcatcgaatgccagaaccaggtgctgggccagtcggtgcctgtg
gccggtacaccgttctcgctgaattaccgcagcgaccgggttccggggcggcaggcggcg
cgcagcctccgcatcccgctcagtggcagccaggtgcccgcgagcctgcagcggatagat
ctgcagatcgaggtggccggccggcggttccaccagagcttcgccggccacccgaaccag
gtccacacgttcgtctgggacggcaaggatgcctttggccgggaactgccgtccgcccag
acggcaacggtgcgggtcgggtatgtctatcgggctgtctattacgctcccgcgaatttc
tcgcgcagctttgcggcgaccggcctgggcattctttccggagaccggcgccgccatgag
atcaccctctggcgcgagtcccggccgatgctcggtgctgtggacgcccgggtccttggt
ctcggcggctggagcctgaacgcccatcatatgtacagtgcacccgacgcggtgctgtac
aagggcgatgggacgcggcgcagtgcgaaggacgtgggcgccctgatcaccactgtggcc
ggaaacgggaatggcacgaataccggcgatggcgggccagcgctggaggccgggatcaac
ggtccctacgacgtcgcgatcgcaccggacggctcgatcttcctggcggccggcgatcgg
gtgcgcaaggtcgacgtgcgaggggtgatttcgaccgttcccgggaccgccggcaactcc
ggcatcttgaacgtcgcggtggatgccggcgggtccgtgttctttacgcgccgcaacggc
ggacctcgaatctttcgggccaatccggacggcaccgtacatcacgtggccggaaacggg
tccaggacctttgccggtgatggcgggccggccgtgaacgcgagtttcatcgacccgcgc
ggcatcgcggtcggtgccgacggcagcctgtacgtgggcgacttccgcacacaccgggtc
cggaggatcgggcccgacgggatcatccggacggtcgctggcaacggcggctctggcatc
ggcgggatcggggggcccgcggtacaggcacgcatcgaccggacctatgacgtggcggtc
ggccccgagggagacctgtacatcgactcgcacaattacacggtgtttcgggtgggaccc
gatggcatcatccaccgggcagcgggcagggtctgcaacggcttcagcggtgacggaggg
gatgcgacattggcctgcatggggcgtgtgagcgccgtcacggctgcgtccgacggtacg
atcgcgattgccgacatcatcgacaatcgccgcatccggttggtgaccccggatggcatc
atccgcaccgtggccggaaccggacagtcgggattcaccggcgacggagggcccgccgag
cgggccacaatcgggggcaccgaaatcagcttcggccccgatggctcgctgtacctggcc
gattccagtaaccggcgcgtccggcgcatcgcgtcgagcctgggcgggacgttgggcggc
gcccgtatggtcgcttcgcgggacggcagcgagcactatgttttcgaccacaccgggcgc
cacctgcgcaccgtagacaatgtgaccggtgcactccgttacgtcttcggctacgacgtt
cgcgggctgctagtgcagatcgaggatggggatggcaaccggacaaggatcgaacgggat
gccactggagacgtggtcgccatcgtgggccccgatggtcagcgtacggtggtgtccgtg
ggggcgcatgggtacctcgcttcggtcacgaacccgatgggagagtcgagccatttcgcc
taccgggcacgcggtctgctgacgggtctcaccgatccgcgaggcttccagtccgcctat
acgtacgatgcgctcgggcggctcgcgggcaccggagacccggccggcggcggttggaat
atcacccgcggggccatcgcgaacggctatgaggtcggaatgacctcggccgagggacgc
gccacccgttaccgcgtggagcagacgccgactggcaaccgaatgcgcgagaaccttctc
ccggacgggacccgggaaacgctggcgttgaataccgctgggcggcgcatcttcaccgcc
gcggacggcacgttggcagagatcctggagggtccggacccgcgcttcggcatgagcagt
ccggtgccgtccagcgtgacgcttcgcacgccgagcggacgtgtccagcagaccacgacg
cagcgcaccgcgatgctgggacaggcgggcgaccccctaagccatagcgaactggtggag
attgtcactagcaacggacgaatgacccaggcccgtttcagtgccgcggatcgtgtgtgg
ttcatcacaagcccgcaggggcggcagcgcagcatcgaactcgatgcgcgtagccggatc
cggagagacacgattgccgggctggcgcctgtggcgtacgaacgggatgccagggggcgg
ctgacccgcatgatccagggcgccgccggggaccgggtccatgcgttgagctacaacgaa
tcgggccaggtcgcgacggtgtcggacccgctttcacggacccgaggctacgcatacgat
tccgcgggccgtatcgttcgtgagacgttgccggacgggcgcgaaatcggttacgtctat
gaccccgccggaaaccctgcggcgctggtcccgcccggacgtgaggcgcacctgttcgaa
tacacgccggtgaatctggaacaacggtacttaccgccggcccttccgggcgtggatacg
atcacgcggtaccaatacaaccgcgatcgccagttgaccgcgatcgagcggcccgacggg
caggcgttacggttcttctacgatgccggcgggcgcccggacagcctccgggtctccacg
ggcgagtaccggttcggattccatcccgaaactggacagctcgcatccattgattccccc
acggggatcgaccttgcctattcctgggatggcttccttcccttgagtgagacctgggcc
gggacggtcaacgggtcggtatcccagtcctacgatcacaatttctgggtcacgcaacgg
tcggtgaacggccagggcatcgcctaccagcacgacagcgacggactcctgatcggggcg
ggtgacctgagccttgcacgcgatcccggaaacgggagagtcatcggtagcagcctgggc
ctggtgagcacggcactcgactacaatgctttcggcgagatcgtttcgatccgggcggcg
ggcgctacgggcgtgttagccgagttcgggtattcccgcgacgccgtcggccgtgtgatc
gaggagacggctctgatcgaaggcggcctgacgaggacctcctactcttatgatgtcgcg
gggcggcttgcgacggtctcccgagatggcactgcagtgacgtacacatacgatgcgaac
ggcaaccgcacgcacgtgaacggtctgcagaccgccgtctacgatggtcaggaccgtatg
ctggcctacgggcaggcgcagttcgaatactcggagaacggcgaattggcaagcaggacg
gacggcggcgtgcagacacggtatgtgtacgacgaagtcggcaatctgcagcaggtacac
ctgcccggggatctgcggatcgaatacctgaccgatgggcgcaaccggcgggtgggcaag
cgggtgaacggcgctctcgtccagggcttcctgtaccgtgaccagctgaatccgatcgcg
gaactggatggctcgggacaggtggtcagccgtttcgtgtacgccgagcacgcccacgtg
cctgactatatgatccgcgatgacgcgacctaccggattctctctgaccagctcgggagc
ccgcgcctggtggtgaacgtgggcacaggggaggtggtccagcggatcgattacgacgcc
tggggcaatgtgctgcaagacaccaaccctggtttccagcccttcggctttgcaggtggt
ctgctggatcaacacacgaacctggtccgtttcggagcccgggactacgaccccagcacg
ggccgctggaccgccaaggaccccatccgcttcgccggcggcgaccccaacctctacggc
tacgtcctcaacgatcctctaaattggctcgacccacatgggctttggtcagtaagttta
aatgcttttgcgggcattggcgggggtgtcatatttggtcgcaatgatactggtacatgg
tttatgggtgggcaattgggagttgggattggtgggggcggtgcgcttgatccatttgat
caagggccgacaggcggggcaaggacggatgggccatatggtgcggcatgctcgaccctg
aagcccccctcaaccgggtttagcgcgggcggatccattgggatcggcggatcgtttggc
ggctccaatttcacttatggaggtggcggtggctacaactttgatggcactggaagttct
tatggcggacaggtagggcttaactcaagcctgaacccgatacacagaagaggtctcggg
ctctcggcaggagcagcgggtgtcattaatgtaataggatggtggtaa
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