Thioalkalivibrio nitratireducens: TVNIR_1218
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Entry
TVNIR_1218 CDS
T02408
Symbol
truA_[H]
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tni
Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tni03016
]
TVNIR_1218 (truA_[H])
Enzymes [BR:
tni01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
TVNIR_1218 (truA_[H])
Transfer RNA biogenesis [BR:
tni03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TVNIR_1218 (truA_[H])
Prokaryotic type
TVNIR_1218 (truA_[H])
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
AGA32892
UniProt:
L0DV65
LinkDB
All DBs
Position
1165971..1166822
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AA seq
283 aa
AA seq
DB search
MPGATAEAQRWALGVEYDGSGFVGWQRQKDGASVQAAVEQALGFVAGHPVDLHCAGRTDA
GVHATGQVIHFDTTAVRDERNWLLGANAGLPEPVALLWARLVSRNFHARFSAQGRRYRYV
IANQSVRPALQARGVAWWRYPLDAERMHEAAQALVGTHDFSSLRAAACQAQSAIKTIHSI
RVHRQGRHVVLDVHANAFLHHMVRNIAGVLIPIGQGRREADWVHEIMQARDRRASGMTAP
AGGLYLVGVDYDPVHRLPGAGQAPVWPVLPLTFGEGVGRQDPG
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcccggggccacggctgaagcgcagcgctgggcgctgggagtcgagtatgacggcagc
gggttcgtcggctggcaacggcagaaggacggagccagcgtgcaggccgcggtcgagcag
gcgctcggtttcgtggccgggcacccggtggatctgcactgcgccggtcggaccgacgcc
ggtgtgcatgcaacgggccaggtgatccatttcgataccaccgcggtccgggacgaacgg
aactggctgctgggagccaacgcgggtctgccggagccggttgcgctgctctgggcacgt
ctggtgtcgcggaacttccatgcccggttctcggcccagggccgtcgctatcgttacgtg
attgcgaaccagtcggtgcggcccgcattgcaagcgcggggggtggcctggtggcgctat
ccgctggacgccgagcggatgcacgaggccgcccaggccctggtgggcactcacgatttc
agtagcctgcgggcggctgcctgccaggcccagtcggcgatcaagaccatccattcgatc
cgtgtccaccgccaggggcggcacgtggtgctggacgtacacgcgaatgcgtttctgcat
cacatggtgcgcaacattgccggggtgctgatcccgatcggccaggggcggcgcgaggca
gactgggtccacgagatcatgcaggcgcgggaccggcgtgcgtcgggcatgacggcgccc
gctggcggtctgtacctggtgggcgtggattatgatcccgtgcatcgtctgcccggtgcc
gggcaggcaccggtctggccggttctgccgctgaccttcggggagggtgtgggccgccag
gatccgggctga
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