Thioalkalivibrio nitratireducens: TVNIR_1378
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Entry
TVNIR_1378 CDS
T02408
Symbol
uvrC_[H]
Name
(GenBank) Excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TVNIR_1378 (uvrC_[H])
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tni03400
]
TVNIR_1378 (uvrC_[H])
DNA repair and recombination proteins [BR:
tni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TVNIR_1378 (uvrC_[H])
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
GIY-YIG_UvrC
UvrC_M
GIY-YIG
UVR
HHH_5
HHH
HHH_2
DUF7508
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AGA33049
UniProt:
L0DTX4
LinkDB
All DBs
Position
1341135..1342961
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AA seq
608 aa
AA seq
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MSATEHGFDHKAFLAACTSAPGVYQMLDDAGTVLYVGKARNLRKRLASYFRSAGERSPKT
RAMVAQIADIRVAVTHTEAEALLLEANLIKRHRPRYNVLLRDDKSYPYIFVSNHEYPRLG
FHRGARKKGVRYFGPYPSAVAVRETLNLLQKLFLMRQCEDSVFAHRSRPCLQHQIGRCTA
PCVALIDPDEYAADVQASVRFLEGRSEQVIGDLVQRMEAASAALQFERAARLRDQIAHLR
QISEQQYVAGGDGDADIFALAREGGAAAVQIFFVRHGQNLGNSVRYPKLPEEAGDDEIMA
AILAQYYAEREPSQLVLVSHRPQEPEGLAALLEQRRGGRVRLAWSLRGDRARWVEMAQRN
AELALKTRLAGQAGQQSRLQALAEVLQLPEPPARMECFDISHTQGEGTVASCVVFGPEGP
LKSDYRRFNIAGIAPSDDYAAMHQALDRRFARLKKEAGPLPDILFIDGGQGQVNQALDVL
RSHGIEGMRVVGVAKGPERRAGLETLVLSGVQGPSILPAQSSALHLIQQIRDEAHRFAIT
GHRLRRAKARRESRLEEIPGLGPKRRGALLRHFGGLRGISRAGVEELAKVPGISHNLAQA
IYEGFHEN
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgaccgagcacggcttcgaccacaaggccttcctggctgcctgcacctcggcc
cccggcgtctaccagatgctcgacgatgccgggacggtgctctacgtgggcaaggcccgg
aatctgcgcaagcggctcgcgagctactttcgcagcgccggcgagcgcagcccgaagacg
cgcgcgatggtcgcccagatcgcggacatccgggtggcggtcacgcacaccgaggccgag
gcgctgctgctcgaggcaaacctgatcaagcggcaccggccacgctacaatgtcctcttg
cgggatgacaagagttacccgtacatctttgtttccaatcacgaatacccccgtctcggc
ttccaccgcggtgcccggaaaaagggcgtgcgctacttcgggccgtacccgtcggcggtc
gcggtccgcgagaccctgaacctgctgcagaagctgttcctgatgcgacagtgcgaggac
agcgtgtttgcccaccgcagccggccctgcctgcagcaccagatcgggcgctgcaccgcg
ccctgcgtggcgctgatcgatcccgacgaatacgcggccgacgtgcaggccagcgtgcgc
ttcctggaggggcgcagcgagcaggtgatcggcgacctcgtccagcgcatggaggcggcc
tcggcggcactgcaattcgaacgggcggcccggctgcgtgaccagatcgcgcacctgcgc
cagatctcggagcagcagtacgtggcgggcggcgacggggatgccgacatctttgctttg
gcgcgcgagggtggcgcggccgcggtgcagatcttcttcgtgcgccacgggcagaacctc
ggcaactcggtgcgctacccgaaacttcccgaggaggccggcgacgacgaaatcatggcc
gcgatcctggcgcagtactacgccgagcgggaaccctcgcaactggtgctggtgtcgcat
cgcccgcaggagcccgagggcctggcggccctgctggagcagcgccgcggcggccgcgtc
cggctggcctggtcgttgcgcggcgatcgggcgcgctgggtggagatggcgcagcgcaac
gccgaacttgcgctgaagacccggctggccgggcaggcggggcagcagtcgcggctgcag
gcgctggccgaggtgctgcaattgcccgaaccgccggcgcggatggagtgcttcgacatt
tcccacacccagggcgaaggcaccgttgcatcctgtgtcgtgttcggccccgaggggccg
ctgaagtccgactaccgccggttcaacatcgccggaatcgcccccagcgacgactatgcg
gcgatgcaccaggcgctggaccgccgtttcgcgcgactgaagaaggaggccggtccgctg
cccgacatcctgttcatcgacggcgggcagggtcaggtgaaccaggccctcgacgtgctg
cgcagccacggcatcgagggcatgcgcgtggtcggtgtcgccaagggcccggagcggcgc
gcggggctggagaccctggtgttgagcggggtgcaggggccttctatactgcctgcgcaa
tccagcgccctgcacctgatccagcagatccgcgacgaggcgcaccggtttgcgatcacc
ggacaccggctgcggcgtgcgaaggcccggcgggaatcccggctcgaagagatccccggg
ctgggtccgaaacgaaggggggcgctgctgcgccatttcggcgggctgcgtggcatctcg
cgcgccggggtcgaagagttggcgaaggttcccggcatcagccacaacctggcgcaggcc
atctacgaaggattccacgagaactga
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