Thioalkalivibrio nitratireducens: TVNIR_1419
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Entry
TVNIR_1419 CDS
T02408
Symbol
smc_[H]
Name
(GenBank) Chromosome partition protein smc
KO
K03529
chromosome segregation protein
Organism
tni
Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tni03036
]
TVNIR_1419 (smc_[H])
Chromosome and associated proteins [BR:
tni03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
TVNIR_1419 (smc_[H])
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
CCDC39
AAA_15
AAA_29
SMC_hinge
Fez1
BLOC1_2
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AGA33089
UniProt:
L0DU19
LinkDB
All DBs
Position
1392857..1396348
Genome browser
AA seq
1163 aa
AA seq
DB search
MRLARIKLAGFKSFVDPTTLMLPGNRVGIVGPNGCGKSNTIDAVRWVMGESSAKHLRGDS
SEDVIFNGSASRKPVGQASIELFFDNSEGRLGGEYSSFAEISVRRALSRDGQSKYYLNGQ
RARKRDVTDLFLGTGLGPRSYAIIEQGMISRLIEARPEELRVYLEEAAGISKYKERRRET
ENRIRHTRENLERLDDVREEVERQAGKLTRQAEIAEKYQELAAQRRQRRAELLLLRLKAL
EQRMETERLQLVEAETALTGLRAHVQQKETETEGLRVRRAELEQAQQAAQAGFYDVSADV
SRLEQSIRHAEAELEREAREQVQLEARVQESARAEEAARSRVQEAEAAIEVHDLECETAV
AAQELAEQASETAEEAMHAAREERSQWHRAMAEPQQAAQLARTRMDHADQLLQRARQRRE
RLREEQGRLLSTEGSADLKQAERELAVAAQGYEQLQERRAALRDTLSERRSELQEEQERS
HGAERRAREIAGQLASLKILPGLDRDEDREAFARWAREHGIDPGRRVAAQIEVDPGWEAA
VEVVLGQWFEAVLASLDELPPALPDAAFRALDPAVDAASFPADSLAARVRAPDALRALLA
AVQCAETLDEAWARLDAGGSPGMSVVTPHGSWIGPGWLCHRTVDRQVEGVIERLRLERSL
EQEAAELWAQGEAFSARLDELRDVIRGVEGDLEQTESGLRESQREVSRLEAQVQRLRERA
QQADERRRRLDQEIAELEEEIERASVQRDEALAERNEALSRLEGLDRDRERLEQQVAEAE
RRQREARNDAQQARDRASAMRLAVQEARHRVALEQGQVERLEQQRAQDRERLVQLQEART
GRLAPLDGWRNDLQQRLAQRQESEQALATARAALDACDADLRQLAADLRELGGQVEQGRA
GCEERRLHLRELGVQQDQLAGQFGESGFEPEALGADLPEDAAIPAWEEAVAILDRKIERL
GPINLAAIEEARSLAERSRYLREQHDDLITALETLESAMQKIDRETRALFRQTYDQVNEG
LGQKFRRLFGGGEARLELTGDDLLDTGVAIMARPPGKRLSTIHLMSGGEKALTAAALVFA
IFELNPAPFCMLDEVDAPLDEANVGRFCALLQDMSERIQFIFITHNKTTMAMAEQLIGVT
MHEPGVSRLVSVDIDAAVELAEA
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
gtgcgactcgcccgaataaaactggccggattcaagtccttcgtcgatcccactacgctg
atgctgcccggaaaccgcgtcggcatcgtggggccgaacggctgtggcaagtccaacacg
atcgatgccgtgcgctgggtgatgggcgaatcctcggccaagcacctgcgcggggattcg
agcgaggacgtgatcttcaacgggtccgcttcgcgcaagcccgtgggacaggccagcatc
gagctgttcttcgacaacagcgagggccggctcggcggggagtacagcagctttgcggag
atctcggtgcggcgggcattgtcccgagacgggcagtcgaagtactacctgaacggccag
cgcgcgcgcaagcgcgatgtgaccgatctctttctcgggaccgggctgggtccgcgcagc
tacgccatcatcgagcagggaatgatttcgcggctgatcgaggcgcgtcccgaggaactg
cgtgtctatctcgaggaggcggccggcatttccaagtacaaggagcgccggcgggagacc
gagaaccggatccggcacactcgcgaaaacctcgagcggctcgacgatgtccgcgaggag
gtcgagcgccaggccggcaaactgacgcggcaggccgagatcgcggagaagtaccaggaa
ctggccgcgcagcggcgccagcgccgtgccgaacttttgctattgcgcctgaaggcgctg
gaacagcggatggagaccgagcgcctgcaactggtcgaagcggagacggcgctgaccggt
ctgcgggcgcacgtgcaacagaaagaaaccgagaccgaagggctgcgcgtgcgccgggcg
gaactcgagcaggcgcagcaggcggcgcaggcgggcttctacgacgtgtcggctgatgtc
tcccggctcgagcaatcgatccgccacgccgaggccgaactcgagcgggaggcgcgtgag
caggtgcagctggaggcccgggtccaggagtcggcacgggctgaggaagcggctagaagc
cgcgtccaggaggccgaggcggcgatcgaggtccacgacctggagtgcgagacggcggtt
gcggcgcaggaactcgccgagcaggcgtcggagaccgccgaagaggccatgcatgcggcg
cgagaggaacgttcgcagtggcaccgggcaatggcggaaccgcagcaggcggcgcagctg
gcgcgtacccgaatggaccacgccgaccagctgctgcagcgcgcccggcaacgacgcgaa
cgcctgcgggaggaacaggggcggctgctgtccaccgaaggcagtgccgatctcaaacaa
gcagagcgcgagctggcggtcgcggcacagggatacgagcagttgcaggaacggcgcgcc
gcgctacgtgacacgctgtcggagcgccgctccgaactgcaggaggagcaggaacgctcc
cacggtgccgagcgcagggcgcgggagatcgccgggcagctggcctcgctgaagatcctc
ccggggctggatcgggacgaagaccgcgaggcctttgcacgctgggcacgggagcacggg
atcgatcccgggcgcagggttgcggcgcagatcgaggtcgatcccggctgggaagcggcg
gtcgaggtcgtgctggggcagtggttcgaggccgtgctcgcgtcgctcgacgaactgcca
cctgcgcttcccgatgccgcattccgggcactggatccggccgtcgatgccgcgtcgttc
ccggccgactcgctcgcagcccgggtccgcgcccccgatgcacttcgcgcgctgctcgcc
gcggtgcagtgcgccgaaacgctggacgaagcgtgggcgcggctcgatgcggggggatct
ccgggaatgagcgtcgtgaccccgcacggcagctggatcggcccggggtggctttgtcac
cgcactgtcgaccgacaggtcgagggcgtgatcgagcgcctgcgcctggagcgcagcctc
gagcaggaagcggcagaactgtgggcgcagggtgaggcattcagcgcgcgcctcgacgaa
ctccgggacgtgatccgcggcgtcgagggggatctcgagcagaccgagtcgggacttcgc
gaaagccagcgcgaggtcagccgcctcgaagcgcaggtgcagcgcctgcgcgagcgggcg
cagcaggcggacgagcggcgtcggcgcctggaccaggagatcgcggaactcgaggaagag
atcgaacgtgcctcggtccagcgcgacgaagcattggccgaacgcaacgaggcattgtcc
cggctggagggtctcgaccgcgaccgggaacggctggaacagcaggtggccgaggccgag
cgtcgccagcgggaggcccggaacgatgcccagcaggcccgggatcgtgcgtccgcgatg
cgcctggcggtccaggaggcgcggcaccgggtggccctcgagcaggggcaggtcgagcgc
ctcgaacagcagcgcgcgcaggaccgcgagcggttggtgcagttgcaggaggcgcgcacc
gggcgcctggcaccgctggacggctggcgcaacgatctgcagcagcgccttgcccagcgc
caggaatcggaacaggcgctggcaaccgcacgcgcggcgctcgatgcctgcgatgccgac
ttgcggcagctggctgcggatctccgggaactcggcggacaggtggagcaggggcgggcg
ggctgcgaggagcgcaggctgcacctgcgcgagctgggcgtgcaacaggaccagcttgcg
ggccagttcggggaaagcggattcgagccggaggcgctgggcgcggatctgccggaggat
gcggcgattcccgcctgggaagaggcggtcgcgatcctggaccggaagatcgaacgcctg
ggtccgatcaacctcgcagcgatcgaagaggcacgcagcctggcggaacgcagccgctat
ctcagggaacagcacgatgacctgatcaccgcgctcgagacgctggagagcgcgatgcag
aagatcgaccgcgaaacccgggcgctgttccggcagacgtacgaccaggtcaacgagggg
ctggggcagaagttccggcgtctgttcggaggcggcgaagcgcggctcgaactcaccggc
gacgacctcctcgataccggcgtggcgatcatggctcgcccaccgggaaagcggctctcg
accatccacttgatgtcggggggcgaaaaggcgctgaccgcagctgcgctcgtgttcgcg
atcttcgaactcaatccggcgccgttttgcatgctcgacgaagtggacgcgccactggac
gaggccaacgtaggtcgattctgtgcgctcttgcaggacatgtcggagcggatccagttt
atcttcatcacgcacaacaagacgacgatggccatggcggagcagctgatcggcgtcacc
atgcatgaaccgggcgtgtctcgcctggtcagcgtggatatcgatgccgcggtggaactg
gccgaggcctga
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