KEGG   Thioalkalivibrio nitratireducens: TVNIR_1462
Entry
TVNIR_1462        CDS       T02408                                 
Name
(GenBank) CRISPR-associated RAMP protein, Csm4 family
  KO
K19139  CRISPR-associated protein Csm4
Organism
tni  Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:tni00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tni02048]
    TVNIR_1462
Prokaryotic defense system [BR:tni02048]
 CRISPR-Cas system
  Type III CRISPR-Cas system
   Subtype III-A factors
    TVNIR_1462
SSDB
Motif
Pfam: RAMPs
Other DBs
NCBI-ProteinID: AGA33132
UniProt: L0DVT9
LinkDB
Position
1440940..1441914
AA seq 324 aa
METLRLTLRPRSAFGGPLRGDTLFGQLCWAVRNRRGEEHLRELLDGYTQGRPFAVCSDAF
PAGFLPRPALPLYRFRPIPDSDRKAVKKRRWLPLQALARPVEDWLHEAMDDAAVVRQQAG
TSAPARLASHRAQPHNSIDRRSGTTGPGAFAPYTQAQYWYAQGTQLDLYLLLDPERIGRD
EAITLIDDIGRTGYGRDASIGLGKFDVTAADPATLVAAPDANACFTLAPCAPQGLGLRPD
RAFYEVFTRFGRHGDRAVYGRGGPFKTPVLLAGTGGLFAMDSPPRAGFLGQGLGGAGRMS
KTIPETVQQGYAPCAAVRLNWEAA
NT seq 975 nt   +upstreamnt  +downstreamnt
atggaaacattgcgcctcacgctgcgcccccggtccgccttcgggggaccgttgcggggg
gacaccctgttcggacagttgtgctgggccgtgcgcaaccgccggggcgaggaacacctg
cgggaattgctcgacggatacacgcagggacgcccgttcgcggtgtgctccgatgccttc
ccggcaggttttctgccccggccggcgctgccgctgtatcgctttcggccgatcccggac
agcgaccgcaaggcggtcaaaaagcggcgctggctgccgcttcaggcactggcccgtccg
gtggaggactggctgcacgaggcgatggacgacgcggccgtggttcggcaacaggccggg
acatcggcaccggcgcggcttgcgagccaccgcgcccagccgcacaacagcatcgaccgg
cgcagcggcactaccggccccggcgcgttcgcgccctatacccaggcgcagtactggtat
gcgcagggaacgcaactcgatctgtatctgttgctggatccggaacggatcggccgcgac
gaggcgattacgctgatcgacgatatcgggcgcaccggctacggtcgcgacgccagcatc
gggctgggcaagttcgacgtgaccgcagcggaccccgccaccctggtagcggcccccgac
gccaacgcctgcttcaccctggcaccgtgtgcgccgcaaggcctcggcctgcgcccggac
cgcgccttctacgaagtgttcacgcgcttcggccggcacggcgaccgtgcggtctacggg
cggggcgggccgttcaaaacaccggtactgctcgcgggtaccggaggcttgttcgcgatg
gactcgccgccgcgcgccggctttctggggcaggggcttggcggcgccggccgaatgtcc
aagaccatcccggaaacggtgcagcagggctacgcgccctgcgccgcggtgcggctgaac
tgggaggcagcatga

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