KEGG   Thioalkalivibrio nitratireducens: TVNIR_1475
Entry
TVNIR_1475        CDS       T02408                                 
Name
(GenBank) CRISPR-associated RAMP Cmr3
  KO
K09127  CRISPR-associated protein Cmr3
Organism
tni  Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:tni00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tni02048]
    TVNIR_1475
Prokaryotic defense system [BR:tni02048]
 CRISPR-Cas system
  Type III CRISPR-Cas system
   Subtype III-B factors
    TVNIR_1475
SSDB
Motif
Pfam: Cas_Cmr3 RAMPs
Other DBs
NCBI-ProteinID: AGA33145
UniProt: L0DVZ1
LinkDB
Position
1455491..1456822
AA seq 443 aa
MAKKHRKGPPRYSRKPQAKPAQAAGMRQSAVPQSGGAGAAADVVGAARPSRTLSLTPLAP
IIVRSGRPFDGWTGVDPARFPPPSTLAGCLRTAWARAQGVGFPLAPDAESAAASAARLTG
LALAGPLLLRGSTVLLPKPADALYFGHGRQARCVRAEPRPFDTGCGADLPEGLLPVQLSR
PVEGKPGPGPSWWAWQDWLDFRRGEEGEVTHAELQQRGWSPPAGDRRTHVAIDRDRQAAV
EGRLFQTEGLEFASDPSDAAAGTFGDEPLRLLARCAEPLGAALVTLGGERRLAAMTPEPE
SAWPQPPDGWFEDIVRAGGLSLTLVTPAVFAAGYLPGWLDADRAPPDSVFDATSPPRPRL
HLRAATVDRWQPHSGWDLARQQPRPTRKLVPAGATYWFALAGDAEPEALRGLWLASVCDD
EQDRRDGFGLALPAPWTPVADSN
NT seq 1332 nt   +upstreamnt  +downstreamnt
atggcgaagaaacacagaaaaggtccgcctcgctactcgcggaagccgcaggcaaaaccg
gcgcaggccgccggaatgcgtcaaagcgctgtgccgcaatccgggggggctggcgcagcg
gctgatgttgtcggcgcggccaggcccagccgcacgctgagcctgacgccgctggcaccg
atcatcgtacgctcgggccggcccttcgacggctggaccggggtcgacccggcccggttt
ccgccgccctcgaccttggcgggttgcctgcgaacggcttgggcgcgcgcccagggcgta
gggtttccgctggcaccggacgccgaatccgcggctgcttccgccgctcgtctgaccggg
cttgcgctggcggggccgctgctgctgcgtggatccactgtgctcctgcccaagccggcg
gacgcgctctacttcgggcatggccggcaggcgcgttgcgttcgggccgagccgcggccg
ttcgacacgggttgcggcgcggacctgcccgagggtctgttgccggtgcaactgtcgcgt
ccggtggaaggcaagccgggaccggggccgagttggtgggcatggcaggactggctcgat
ttccggcgtggcgaggaaggggaggttacgcatgccgaactgcagcagcgcggctggtcg
ccgccagccggggaccggcgcacccatgtcgcgatcgatcgggaccgccaggccgcggtg
gaaggccggctgttccagaccgaaggcctggaattcgcgtcggatccgagcgacgccgcc
gcaggtacattcggcgacgaaccgctgcgcctgctcgcgcgctgtgccgagccgctcggc
gcggcactggtgacgttgggcggcgagcgccggctggcggccatgacgccggagccggag
agtgcctggccgcaacccccggacggctggttcgaggacatcgtgcgggcagggggtctc
agcctcacactggtcacgccggcagtgttcgccgccgggtatctcccgggatggctggat
gcggatcgcgcgcctccggacagcgtgttcgacgcaaccagcccgccgaggccccgcttg
catctgcgcgccgctaccgtggaccgctggcagccgcactccggatgggatctggcccgg
cagcagccgcggcccacgcgcaagctggtgccggctggcgcgacctattggttcgcactg
gcaggcgatgccgagcccgaggccctgcgcgggttgtggctcgccagcgtttgtgacgac
gagcaagaccggcgcgatggcttcggtctggcgctgccggcaccctggaccccggtcgcg
gattcgaactga

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