Thioalkalivibrio nitratireducens: TVNIR_1519
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Entry
TVNIR_1519 CDS
T02408
Symbol
crtB_[H]
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni00906
Carotenoid biosynthesis
tni01100
Metabolic pathways
tni01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
TVNIR_1519 (crtB_[H])
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tni01006
]
TVNIR_1519 (crtB_[H])
Enzymes [BR:
tni01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
TVNIR_1519 (crtB_[H])
Prenyltransferases [BR:
tni01006
]
Terpene biosynthesis
Squalene/phytoene synthase
TVNIR_1519 (crtB_[H])
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AGA33186
UniProt:
L0DXT2
LinkDB
All DBs
Position
complement(1503095..1503940)
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AA seq
281 aa
AA seq
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MSPDEYCQQKAARSGSSFYYAFRFLDPERRRAITALYAFCREVDDIVDDCREPAVAHAKL
DWWRDELDALFRGEPRHPITRALQPHLETRNLAREYFDEIVDGMQMDLDYDAYPDFAALS
LYCYRVAGVVGLLSAEIFGYSDRRTLKYAHDLGMALQLTNILRDVHEDAVRGRVYIPLDE
LERFGVDPREFRDNITRDSHRALFAHQAQRARRFYARAEEQLPAADRHAQRPGLIMGAIY
RALLEEIERDGFRVLEYRVRLTPLRKLWIAWRTARAAGRRP
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccgacgagtactgccagcagaaggcagcccgcagcggttccagcttctactat
gcgttccgcttcctcgacccggaacgccggcgtgcgatcaccgcgctgtatgccttctgc
cgcgaggtcgacgatatcgtggacgactgccgcgaaccggcggtcgcccacgcgaaactc
gactggtggcgcgacgaactcgatgccctgttccgcggtgagccgcgacacccgatcacg
cgtgccctccagccccacctcgagacgcgcaacctcgcccgcgaatacttcgacgagatc
gtcgacggcatgcagatggatctcgactacgacgcctaccccgatttcgcggcgctgtcg
ctctactgctaccgggtcgccggtgtggtgggtctgctctcggcggagatcttcgggtac
tcggaccggcgcaccctgaaatacgcccacgatctcggcatggcgctgcagctgacgaat
atcctgcgcgacgtgcacgaggatgcggtccggggccgcgtgtacattccactcgacgaa
ctcgagcgtttcggcgtcgatccccgcgagtttcgcgacaatatcacccgcgattcgcac
cgggcgctgttcgcgcatcaggcgcagcgcgcgcgcaggttctacgcaagggccgaggag
caactgccggcggccgaccgccacgcccagcgccccggcctgatcatgggtgcgatctac
cgtgcgctgctggaggaaatcgaacgcgacggtttccgcgtgctcgaataccgtgtccgc
ctcacgccgctgcgcaagctgtggatcgcctggcgcacggcccgcgcagccggcagacgc
ccgtga
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