KEGG   Thioalkalivibrio nitratireducens: TVNIR_1853
Entry
TVNIR_1853        CDS       T02408                                 
Symbol
hsdR_[C]
Name
(GenBank) Type I restriction-modification system, restriction subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tni  Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:tni00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tni02048]
    TVNIR_1853 (hsdR_[C])
Enzymes [BR:tni01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     TVNIR_1853 (hsdR_[C])
Prokaryotic defense system [BR:tni02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   TVNIR_1853 (hsdR_[C])
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII T1RH-like_C T7-like_Y65 DEAD RecX_HTH1 BID
Other DBs
NCBI-ProteinID: AGA33514
UniProt: L0DV81
LinkDB
Position
complement(1865231..1868347)
AA seq 1038 aa
MVSRARPERLTQNRVVDLFTRTEAEGGLGYRHLGDWHQRENNRPIEPELLRANLRERGYS
EAHIAAALQKLEAAADVTGVTLYQANLRSYNLLRYPVKVLLSPGQPHEDVHLIDWERPER
NDFALAEEVTLKGGHERRPDLVLYLNGIAVAVIELKRSSVEVADGVRQLITNQEPIFNER
FFSTVQLLLAGSDAQGLRYGTTGTPEQFFVQWKDEEGGGETSPGVLLDRPLVQMCGKPRL
LDLIHNFVIFDSGQKKVPRPHQYFGVKAAQARIAEREGGVIWHTQGSGKSILMVLLAKWI
MEHDPAARILVVTDRDELDKQIVGVMRNAGVVGEDDPSPRITSRAQFVEKLGATTPRLLC
ALVHKFDPGDLKGDPPPVHGRFHVFVDECHRTQGGAMNRQMKRWLSEAIFIGFTGTPLLR
KDKQTTREVFGTYIHTYKFPEAVADGVVLDLKYEARDVPQRLTSQQAIDNWFEQKTRNLN
NYQKAVLRKRWATLEELMSAAERKQRIVADLIEDFSLKPRLNNDRGTAILVAASIYDACH
YFRLFQNTSFGPHCGVITSFEPNYNAISRESASSDERYKFDTYKQYVLEDGQSTVQYETE
MKRRFIEEPANTKLLIVVSKLLTGFDAPSCSYIYLDNELRDHNLFQAICRTNRLDGDDKD
YGHIVDFKQLFGDVQQAIAVYSSDELDLDDGGAAENNVELKDWLKEGRKKLDTTREALKY
LCEPVPPPREVEHYLHYFCGDAGVPEALDDTEVLRVSFYKAVASFVRAFSAIAQELEAAG
YTAGEIADLQDEVAFFSEVRAAIKRHSGEELDVKPYEADMRHLINTYIQADPASNLGAVD
SYSLVELIVETGIHDAIARKLNQKGKLSKNAVAEGIINNVRKTIIRNQLTDPRFYEQLSK
LLDDLITDWRKETASYKQFLERAEALVKKMAQGQSGEDMPPELAGRREAQVIYNNLPGIL
AESRPVSEVRELSPDEERQPLKMALAIDRAMREEAPAGWRGDDARERQVLNALFPILGRN
RQATQAVFELIRNQAGYP
NT seq 3117 nt   +upstreamnt  +downstreamnt
atggtgagccgagcccgccctgaacgcctgacgcagaaccgcgtggtcgatctgttcacc
cgcaccgaggcagaaggtgggctgggttatcgccacttgggcgactggcaccagcgtgag
aacaaccggcccatcgagccggagctgttgcgcgccaatctgcgcgagcgaggctattcc
gaggcgcatatcgccgcagccctgcagaagctggaggcggccgccgatgtcaccggggta
acgctctaccaggccaatctgcgcagctacaacctgctgcgctacccggtgaaggtgctg
ctctctccggggcagccgcacgaggatgtgcatctgatcgactgggaacggcccgagcgc
aatgactttgccctggccgaggaagtcacgctcaagggcgggcacgagcgccggcccgat
ctggtgctgtatctcaacggcatcgcggtggcggtgatcgagctcaaacgcagttcggtg
gaggtggccgacggcgtgcgccagctcattaccaaccaggaaccgatcttcaacgaacgc
ttcttcagcaccgtgcaactgttgctggccggcagcgatgcccagggcctgcgctacggc
accaccggcacgcctgagcaattcttcgtgcagtggaaggacgaggaaggtggcggcgaa
acctcgccgggcgtgttgctggacaggccgctcgtgcagatgtgcggcaagccacggctg
ctggatctgattcacaacttcgtgatcttcgattccggccagaagaaagtgccccggccg
caccagtatttcggtgtcaaggccgctcaggcgcgcattgccgagcgcgagggcggggtg
atctggcacacccagggcagcggcaagagcattctgatggtgctgctggccaagtggatc
atggaacacgacccagccgcccgcattctggtcgtgaccgaccgcgacgagctggacaag
cagattgtcggcgtgatgcgcaatgccggggtggtgggcgaggatgatccgtccccgcgc
attacctcgcgcgcccagttcgtggagaagctgggcgcgaccacgccccggctgctgtgc
gcgctggtccacaagttcgatccgggcgatctcaaaggggatccgcctccggtacacggg
cgcttccatgtgttcgtggacgagtgccaccgcacccagggcggggccatgaaccggcag
atgaaacgctggctgagtgaggcgatcttcatcggctttaccggcacgccgctgctgcgc
aaggacaagcagaccacccgcgaggtcttcggtacctacatccacacctacaagttcccg
gaggcggtggccgatggcgtggtgctggatttgaaatacgaagcccgcgatgtgccccag
cgcctgacctcgcaacaagccatcgacaactggttcgagcagaagacccgcaacctcaac
aactatcagaaggcggtgctgcgcaagcgctgggcgacgctagaagagctgatgagcgcc
gccgagcgcaagcagcgcattgtcgccgacctcatcgaggacttcagcctcaagccgcgc
ctgaacaatgaccgcggcacggccatcctggtggcggcctcgatctacgatgcctgccac
tatttccggcttttccagaacacctcattcggcccgcactgcggcgtcatcacctccttc
gagcccaactacaacgccatttcccgcgagtcggccagcagcgacgaacgctacaagttc
gacacctacaagcagtatgtgttggaggacggtcagagcaccgtgcagtacgagaccgag
atgaagcggcgcttcatcgaggagccggccaacaccaagcttctgatcgtggtgagcaag
ctgctgaccggcttcgatgcgccctcgtgcagctacatctacctggacaacgagctgcgc
gatcacaacctgttccaggccatctgccgcaccaaccggctcgacggcgacgacaaggat
tacggccatatcgtcgatttcaagcagcttttcggcgatgtgcagcaggccatcgcggtc
tacagctccgacgagctggatctggatgacggcggtgcggccgagaacaatgtcgaactc
aaggactggctgaaggaaggccgcaagaaactcgacaccacccgcgaggcactcaaatac
ctctgcgagccggtgccgccgccgcgcgaggtcgagcactatctgcactatttctgtggg
gatgcgggtgtgccggaggcgctggacgataccgaggtgctgcgggtgtcgttttacaag
gcggtggccagctttgtgcgggcgttttccgccatcgcccaagagctggaggctgccggc
tacacggcgggcgagatcgccgatctgcaggacgaggtggccttcttcagcgaggtgcgt
gcggcgatcaagcgccactcgggtgaggagctggatgtcaagccctacgaggcggacatg
cgccacctcatcaatacctatatccaggccgacccggccagcaatttgggcgcggtggac
agctactccctggtggaattgatcgtcgaaaccggcattcacgatgcgatcgccaggaaa
ctcaaccagaagggaaaactgtcgaaaaatgctgtcgctgaaggcatcatcaacaacgtc
cgtaagaccatcatccgcaaccaactcaccgatccgcgattctatgaacagctctccaag
ctactcgatgatctgattacggactggcgcaaggagacagcgtcctacaagcagttcctg
gagcgggccgaggcgctggtcaagaagatggcgcaggggcagagcggtgaggatatgccg
cccgaactggccggccggcgcgaggcccaggtgatctataacaatctaccgggcatcctg
gccgaatcgcgcccggtcagtgaggtgcgtgagctgtccccggacgaggaacgacagcct
ctgaagatggcgctggcgatcgaccgcgccatgcgcgaagaggctccggccggctggcgt
ggcgacgatgcgcgcgagcggcaggtgctcaatgcgctgttcccgatcctcgggcgaaac
cggcaggccacccaagccgtgttcgagctgatccggaatcaggcgggctacccatga

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