Thioalkalivibrio nitratireducens: TVNIR_2258
Help
Entry
TVNIR_2258 CDS
T02408
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
tni
Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
TVNIR_2258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
ResIII
Zn_ribbon_3
Prefoldin_2
DUF7801
HypA
LRRFIP
DivIC
KIF21A
Motif
Other DBs
NCBI-ProteinID:
ALU34406
UniProt:
A0A0U3FMD3
LinkDB
All DBs
Position
complement(2300313..2306738)
Genome browser
AA seq
2141 aa
AA seq
DB search
MIPSIVASELQEAIRRFLYASFPMTTPGFRRDDGGTMLDDLLAEPEAIFKGPYLGLGLPF
RRMEPGATLPFERIELAFTPYRHQVKAFQRLCGPNPRSTLVATGTGSGKTECFSLPILDY
CAGRPEPGVKAVIVYPMNALAADQARRFARDIHRDRESLRGRVSVGLYVGDSGPSVHKVM
SRDSVITCRETLREYPPDILLTNYKMLDFLLLRPRDQRLWRHNEPGRLRYLVVDELHTFD
GAQGTDLACLVRRLRDRLLPGEGLACVGTSATLGGESAGQELIDYASQVFASPFDADAVV
MEDRETPEEFLAGAEVRFTNWPTTGTYGGGYAQVQDAAVDNLRKLAMRWFGGDAPALDAR
DPAVAMQARFQLAERLRECRAFRELLEHAPGLLDVNAVVADWAQRFRIEPAQARQMLDSL
LALVSWARRPNDPHATSTDDPGQPFVTLRLQLWLRELSRLVANVGVRPMLRFADDLTDLA
SPLHLPVVHCRECHATGWLSVRKADEGRLETDLQAIYRTYFGNHPEMCLLFPLEGTPPAE
PKGIEGAICPQCGQLLPKAGATQCPHCKGDAPVVPVWEPNMRRTQARGELNVQRSHHDCP
FCGAHEGLSLIGSRAASLSSVLIGRLFASPYNDHRKLIAFSDAVQDAAHRAGFFGARTYS
TLIRGAIARFVTAQGEGLPLSVVASEMPRYWRNRTGSEARFVGTFIAPNMEWLRDYEYLK
VQGQLPPHSAVPGWVEQRLTWEVLQAFGLRARIGRTLERSRVAAVGPDPGALRESATRLA
QRLSEEIGSLRGIGETPVLRYLLGFLWRMRVGGAFYHPMLDGYIQDRGKPYALYRTPHMP
NYGGAAAPPALVTLGRVGRSFTALAADGRSGYADWFDKTLAVGDAVLASAEYRQVIQRVL
GQLTQDGFLIEQEVGGDSVWGLDPERWICTTAVAALTCERCGHQIQVPRQELSDWTEMPC
LRSPCAGIYQPSTVALPASGGTSGALHRLVAAEHTALLDSETRHMVEHSFIDGDAPWDVN
LLSATPTLEMGIDIGDLSAVLLCSVPPGQANYLQRIGRAGRRDGNALTVTLANAHKHDLY
FYADPLAMLAGEVRPPGVFLQATAVLERQLIAYCFDRWAASGIDDSAIPGNLQETLNGVE
AEAGGRFPLSLLEFVERHRAEILRSFLGFFPDLPDESREHLGTFLFGGGGTSGMAVRLVN
RLHQLVQERKSLTARIDRLKKQKERLESQPQDDRVREELEAVLAERGALMALRRRMNGKP
TLNFFTDEGLLPNYAFPEEGVTIHSVILRRVTQAERDEGESGRRYERINFEMQRPAVAAL
SELAPMNRFYAVGRRVEIDQVDLSVSSAQEWRLCDRCHYMENVTESGDAHTVCPRCGSPQ
WADAGRKRTLLKLRQVFATADDRGSRIGDDSDQRTPAFFQRQMLVDVPLSSVGKAYRLAS
EELPFGFEYLPRVKLREVNFGQPGVESHEFAVAGELASRPGFQLCRHCGKVRRKGGRERA
SFQHAYDCKLRKPGAEESEADYFDSLYLFRELESEAVRILLPLAEVGSSGTRLHSLIAAL
NLGLRRFFRGDVGHIQVAHQSEPAGGESRKHFLVLFDSVPGGTGYLKELLRQPDNLMNLL
RAAFEVVSRCECREDETSDGCYRCLLAYRESRRMDEISRKAAEEILGKILAAADTLQPID
GLASVDINALLESELEQRFVDALANAPGVTLSPQLVHGKSGFFLSVLPQRAGQRAAAWKV
EPQVQLGPGQGVAAVKTKPDFVLWPVREAPGLLSVAVFMDGFQYHWNKADDDTLKRQALL
DSGRFRVWSLSWHTLPMPGMKQVNPAAQLLKTGQQATMQTLFTRLAPSGGWDPYLAYGGF
IDKGPFGWLLAYLAGDTENLDRLRFAALSRALGWLDSRSVQDPAFRNALLEDVQSRFPEA
VHAGWSGTQQDPRILGGLLPATGGDDTPMAGIDVGVCLPRSAMQAAAGGDLQGLQADIRV
HLGMDDEQARQDKDFETLWGMFWGAANLLQFLPRLTLASARGIQQGLYGVVFRAAEPSGE
GSEADDGDALQWQEIAQNSLFGERVLRLRDAGVPPPEVGIELVDEAGAVLPEVELLWRDQ
RIAVVADVDESGRAGLERLGWTVLDGLDDAVIAELTGRLTP
NT seq
6426 nt
NT seq
+upstream
nt +downstream
nt
atgatcccctcgatcgtcgcgagcgagttgcaggaggcgatccgtcgcttcctgtacgca
agcttcccgatgactacgcctgggttccggcgcgacgacggcggcaccatgctcgacgat
ctcctcgccgagccggaggccatcttcaagggtccgtacttgggcttggggctaccgttc
cggcgcatggagcccggcgcgacgctgccattcgagcggatcgagctggcgttcaccccg
tatcgccaccaggtcaaggccttccaacgcctctgcggtccgaacccccgttccacgctg
gtcgcaaccggaaccggttcgggcaagaccgagtgcttctcgctgcccatcctcgactat
tgcgccgggcgcccggagccgggcgtgaaggcggtcatcgtgtacccgatgaacgcgttg
gcggccgatcaggcccggcgttttgcccgcgacatccaccgggatcgggagagcttgcgc
gggcgggtcagcgtcggtctctacgtgggtgacagcggaccctcggtgcacaaggtgatg
agccgcgacagcgtgatcacctgccgcgagaccttgcgcgaatacccgccggacatcctg
ctcaccaactacaagatgctggacttcctgctgctgcgtccgcgggaccagcgtctgtgg
cgccataacgaaccgggccgcttgcgctatctcgtcgtcgacgagctgcataccttcgac
ggtgcccagggtaccgatctcgcctgtctggtccgccgcctgcgcgatcgactgctgccg
ggcgaagggcttgcctgtgtcgggacgtcggcgaccctgggtggcgagtcggcgggccag
gaactgatcgactacgcctcccaggtgttcgcgagccccttcgatgccgatgcggtggtg
atggaggatcgggaaaccccggaggagttcctggcaggcgccgaggtccgcttcacgaac
tggcccaccaccggcacctacggtggcggctatgcgcaggtgcaggacgccgcagtggac
aacctgcgcaagctggcgatgcgctggtttgggggtgacgccccggcgctggatgcacgc
gatccggccgtggcgatgcaggcccgctttcagctcgctgagcggctgcgcgagtgccgc
gcgttccgcgagttgctggagcacgcaccggggttgctggatgtgaatgccgtggtggcc
gactgggcgcagcggttccgaatcgagccggcacaggcgcggcaaatgctcgacagcctc
ctggcactggtttcgtgggctcgccgtccgaacgatccccacgcgacgagcaccgacgat
ccgggccagcccttcgtgaccctgcgcctgcagctctggctgcgcgagctgagccggttg
gtcgcgaacgtcggagtccgcccgatgctccgtttcgccgacgacctgacggacctcgca
tcgccgctgcacttgccggtggtgcactgccgcgaatgtcatgcgactggctggctatcg
gtgcgcaaggcggacgaagggcggctcgagaccgacctgcaagcgatctaccggacctat
ttcggcaatcacccggaaatgtgcctgctgttcccgctggaggggacaccgccggccgag
ccgaagggcatcgagggggcgatctgcccgcagtgcgggcaactgcttcccaaggctggc
gcgacgcagtgcccgcactgcaagggcgatgccccggtcgtgccggtctgggagcccaac
atgcgccgcacgcaggcgcggggcgagctgaacgtccagcgcagccaccacgactgcccg
ttctgcggcgcgcacgaggggctgagcctgatcggctcgcgcgcggcgtcgttgtcgagc
gtgctgatcggacggctgtttgccagcccatacaacgaccaccgcaagctgatcgcattc
tccgacgcggtgcaggacgccgcgcatcgggcaggattcttcggagcccgaacctacagc
acgctgatccgcggggcgatcgcgcgtttcgtgacggcgcagggggagggcctgccgctg
tcggtggtcgcgagcgagatgccgcgctattggcgcaaccgcaccggtagtgaggcgcgc
ttcgtcggcaccttcatcgcaccgaacatggagtggcttcgggactacgaatatctgaaa
gtccagggtcagctcccgccgcacagcgccgttcccgggtgggtggaacagcgcctgacc
tgggaggtgttgcaggcgttcggcctgcgtgcccggatcgggcgcacgctggaacgttcc
cgtgtcgcggccgtcgggccggatccgggggcgctccgggagtccgcaacgcgcctggcc
cagcggctttcggaggagatcggctccttgcgcgggatcggtgagacgcccgtgctgcgc
tacctgctggggttcctctggcgcatgcgcgtgggcggtgccttttatcacccgatgctg
gatggctacatccaggatcgcggcaaaccctacgcgctctaccgcaccccgcacatgccg
aattacgggggtgcggccgctccgccggcgctcgtgacattgggccgggtggggcggtcg
ttcaccgcactcgcggccgatgggcgctcgggctatgcggactggttcgacaagacgctc
gcggtgggcgatgcggtgctggcctctgccgaataccgccaggtgatccagcgggtgctc
gggcagctcacgcaggatggtttcctgatcgaacaagaggtgggtggtgactcggtctgg
ggtctggacccggagcgctggatctgcacgacggcggtggcggcgctgacctgcgaacgc
tgcggtcatcagatccaggtgccacgacaggagctcagcgactggaccgagatgccctgc
ttgcgcagcccttgcgcgggcatctaccagccgtccacggttgcattgccagcctccggc
ggcacgagcggggcgctgcaccggttggtcgcggcggagcacactgcgctgctcgacagc
gagacgcgtcacatggtggagcattccttcatcgatggcgacgcgccctgggacgtgaac
ctgctctccgccaccccgacgctcgaaatggggatcgatatcggcgatctttctgcggtg
ctgctgtgttccgtgcctccggggcaggcgaactacctccagcggatcggccgcgccgga
aggcgggacggcaatgcgctgaccgtgaccctggcgaacgcacacaaacacgatctctat
ttctacgccgatccgctcgcgatgctggcgggcgaggtgcgtccgccgggcgtgttcctt
caggcgaccgcggtccttgagcggcagctcatcgcctactgtttcgatcgctgggccgca
tccgggatcgacgattccgcgattcccggtaacttgcaggaaaccctgaacggggtcgaa
gcggaggccggcggtcgcttcccgttgtcactgcttgagttcgtggaacgccaccgtgcc
gagatcctgcgcagctttctcggtttcttcccggatcttccggacgagtcgcgcgagcac
ttgggcaccttcctgtttggcggcggcggaacctccgggatggcggtccggctggtgaac
cggctgcaccaactggtgcaggagcgcaagagtcttacggcccggatcgatcgtctgaag
aaacagaaggaacgtctggagtcacaaccccaggacgatcgggtccgggaggaactcgag
gccgtgctggccgaacgcggcgcgctgatggcgctgcgtcggcgaatgaatggcaagccc
acgttgaatttctttaccgacgagggcctgttgccgaactacgcgttcccggaagaggga
gtcaccatccactcggtgatcctgcggcgcgtgactcaggcggagcgggacgagggtgag
tcgggacgtcgctacgagcgcatcaactttgaaatgcagcgcccggcggtggctgcgctg
agtgagttggcaccgatgaaccgcttttacgcggttggccggcgggtggagatcgatcag
gtggatctctcggtgagcagcgcgcaggagtggcggctctgcgaccgctgccactacatg
gagaacgtgaccgagagcggagatgcgcacacggtctgtccgcgctgcgggagcccgcaa
tgggccgatgccgggcgcaaacgcacgctgctgaaattgcgccaggtgtttgccaccgcg
gatgaccgaggcagccgcatcggcgatgacagcgaccagcgcacgccggcgttcttccag
cgccagatgctggtggacgtgcccctgtccagtgtgggcaaggcctaccggctggcatcg
gaggaactgccgttcggtttcgaatacctgccgcgggtgaagctgcgcgaggtgaacttc
ggccagccgggtgtggaatcccacgagtttgcggtggccggcgaactggcctcgcggccc
ggattccagttgtgccggcactgcggcaaggtgcggcgcaaaggcgggcgcgagcgcgca
tccttccagcatgcctacgactgcaagctgcgcaagccgggtgccgaggagagcgaagcc
gactatttcgacagcctgtacctgtttcgggagctggagtccgaggcggtgcggatcctg
ttgccgctggccgaggtggggtcgtcgggaacacggctgcactccctgattgcggcactg
aacctgggcctgcgccgcttcttccgcggcgatgtcggtcatatccaggtggcgcaccag
tccgagcccgcgggcggcgagagccgcaagcactttctggtgctgttcgacagcgtgccg
ggcggtaccggttatctgaaggagctgctgcgccagccggataacctgatgaacttgctg
cgggcggcctttgaggtggtcagtcgctgcgagtgtcgcgaagacgaaaccagcgatggc
tgctaccgctgcctgctcgcctaccgcgagagccgccggatggacgaaatctcgcgcaag
gcggccgaggagatcctgggcaagatcctggccgccgccgacaccctccagccgatcgac
gggctcgcgtcggtggacatcaatgcgctgctggagagcgagctcgagcagcgtttcgtg
gacgcgctggccaacgcgcccggggtgacgctctcgccccaactcgtgcacggcaaatcc
gggttctttctgtcggtgctgccccagcgtgccgggcagcgcgccgcggcctggaaagtg
gaaccgcaggtgcagctcgggccggggcagggtgttgctgcggtgaagacgaagcccgat
ttcgtgctgtggccggtacgcgaggcgccgggtctgctgtcggtggccgtcttcatggac
gggttccagtatcactggaacaaggcggacgacgacaccctgaagcgtcaggccttgctc
gacagcggccgcttccgggtgtggagtctgagctggcacacgctgccgatgccgggcatg
aagcaggtcaacccggcggcacagctgttgaagacggggcagcaggcgacgatgcagacg
ctgttcacccgactcgcgcccagcggtggctgggatccctatttggcctatggcggcttc
atcgacaagggaccatttggctggttgttggcttatttggcgggcgacacggagaacctg
gacaggctgcggtttgccgcgttgtcccgggcattggggtggctggattcgcgcagcgtg
caggaccccgcgtttcggaatgccttgcttgaggacgtgcagtcgcggttcccggaggcg
gtgcacgccggttggagtggcacgcagcaggacccgagaatcctgggtggattgctgcct
gcaaccggcggtgacgacacaccgatggcggggatcgatgtcggcgtctgccttccacgc
agtgcgatgcaggcggccgccgggggcgatttgcaggggttgcaagcggacatccgagtg
cacctcgggatggacgatgagcaggcccggcaggacaaggatttcgagaccctttggggc
atgttctggggtgcggcgaacctgcttcagttcctgccgcggctgacgctcgcttctgct
cggggcatccagcaggggctgtacggcgtggtgtttcgggcggctgaaccgtccggggag
gggtccgaggccgacgacggcgatgcgttgcaatggcaggagatcgcccagaattcgttg
tttggggaacgtgtgcttcggctgcgcgatgccggggtgccgccaccggaggtcgggatc
gagctggtcgacgaggcgggcgcggtgctgcccgaggtcgaactcctgtggcgggaccag
cggattgcggtggtggcggatgtggacgaatcggggcgcgcgggcctggagcggctgggc
tggaccgtgttggacggtctggacgatgcggtgatcgccgaattgacgggcaggcttacg
ccgtga
DBGET
integrated database retrieval system
