Thioalkalivibrio nitratireducens: TVNIR_2545
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Entry
TVNIR_2545 CDS
T02408
Symbol
ssb_[H]
Name
(GenBank) Single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni03030
DNA replication
tni03430
Mismatch repair
tni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TVNIR_2545 (ssb_[H])
03430 Mismatch repair
TVNIR_2545 (ssb_[H])
03440 Homologous recombination
TVNIR_2545 (ssb_[H])
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tni03032
]
TVNIR_2545 (ssb_[H])
03400 DNA repair and recombination proteins [BR:
tni03400
]
TVNIR_2545 (ssb_[H])
03029 Mitochondrial biogenesis [BR:
tni03029
]
TVNIR_2545 (ssb_[H])
DNA replication proteins [BR:
tni03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TVNIR_2545 (ssb_[H])
DNA repair and recombination proteins [BR:
tni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
TVNIR_2545 (ssb_[H])
TLS (translesion DNA synthesis) factors
Other SOS response factors
TVNIR_2545 (ssb_[H])
Mitochondrial biogenesis [BR:
tni03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
TVNIR_2545 (ssb_[H])
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSB
OSB_SSB
DUF3127
tRNA_anti-codon
SSB_1
YorF
Motif
Other DBs
NCBI-ProteinID:
AGA34186
UniProt:
L0E0L4
LinkDB
All DBs
Position
complement(2638896..2639372)
Genome browser
AA seq
158 aa
AA seq
DB search
MARGVNKVILLGNLGADPEKRETPSGLTITNLRIATSEQWTDKQTGEKRENTEWHRVVLF
GRLGDIAADYLSKGSQVYIEGRIQTRKWQGQDGQDRYTTEIVANEMQLLGGRGGSSGGAG
GSGGDYGSRNQGSQEPPWDQQGGGPSGGRGIQDDDVPF
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcggagtgaacaaggtgattctgctcggcaacctcggtgccgaccccgaaaaa
cgcgagacgccatcgggcctgacgatcacgaacctgcgtatcgcgaccagcgagcagtgg
acggacaagcagaccggcgagaagcgcgagaataccgaatggcaccgcgtggtgctgttc
gggcggctgggcgacattgccgccgattacctgagcaagggctcgcaggtctacatcgag
gggcgcatccagacccgcaagtggcaggggcaggacggccaggatcgctataccaccgag
atcgtggccaacgagatgcagctgctcggcggccgtggcgggtcgtcgggtggtgcgggc
ggctccggtggcgactacggcagccgcaaccagggttcgcaggaaccgccctgggaccag
cagggcggcggcccttcgggcgggcgcgggatacaggacgatgacgtacccttctga
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integrated database retrieval system
