Thioalkalivibrio nitratireducens: TVNIR_2548 Help Entry TVNIR_2548        CDS       T02408                                  Symbol uvrA_[H] Name (GenBank) Excinuclease ABC subunit A   KO K03701   excinuclease ABC subunit A Organism tni  Thioalkalivibrio nitratireducens Pathway tni03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:tni00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     TVNIR_2548 (uvrA_[H])  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:tni03400]     TVNIR_2548 (uvrA_[H]) DNA repair and recombination proteins [BR:tni03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      TVNIR_2548 (uvrA_[H])   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       TVNIR_2548 (uvrA_[H]) SSDB OrthologParalogGFIT Motif Pfam:  UvrA_DNA-bind UvrA_inter ABC_tran SMC_N nSTAND1 AAA_16 AAA_29 RsgA_GTPase AAA_21 AAA_23 DnaJ_CXXCXGXG Viral_helicase1 SLFN-g3_helicase Motif Other DBs NCBI-ProteinID:  AGA34189 UniProt:  L0DX58 LinkDB All DBs Position 2642221..2645064 Genome browser AA seq 947 aa AA seqDB search MSTIKIRGARTHNLKDIDLDLPRERLIVVTGVSGSGKSSLAFDTLFAEGQRRYVESLSTY ARQFLSMMEKPDVDLIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARAGEPRC PEHDETLAAQTISQMVDQVLALPAGERLMLLAPIVRGRKGEHTRQLEAMRAQGFLRARIN GEIFELDALPPIDPKRKHDIEIVIDRFKVRDDLRQRLAESFETATELAEGLALVAWMDEP DRAPLVFSARFACPVCGYAIRELEPRLFSFNNPAGACPACDGLGVRQFFDPERVVAMPEL SLAGGAVRGWDRRNAWYFSLLKSLARHYGFDVETPWLDLPASVRAVILHGSGTEKIRFSQ QGLDGRSRSEQRPFEGVIPNLERRYRETDSAAVREELGRYLASHACPECDGARLNTAARH VFVNGSNLPAVTRMSVADARAFFHDLRLPGRFARIADKIVREINARLGFLVDVGLDYLTL DRSAETLSGGEAQRIRLASQIGSALVGVMYILDEPSIGLHQRDNERLLRTLTNLRDLGNT VVVVEHDEEAIRRADFVVDIGPGAGRHGGAIVAAGTPEKVARHPESLTGAYLNGRRAIAV PAQRRDPDPERILMVRGARGNNLKDIDAAFPVGLLTCVTGVSGSGKSTLVNDTLYPAVAN ALHRSTHPVAAHAGIDGLEWIDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAATAEA RSRGYRPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVFVPCDVCRGQRYNRETLEVRYK GRNIHEVLEMTVEDALEFFAPVPVIRRKLDTLMDVGLAYIQLGQNATTLSGGEAQRIKLA RELSKRDTGRTLYILDEPTTGLHFHDVEQLLAVLHRLRDHGNTLVVIEHNLDVIKTSDWL IDIGPEGGDHGGRILTAGAPETVAACRASHTGRFLAPMLAPARVHRA NT seq 2844 nt NT seq  +upstreamnt  +downstreamnt atgagcacgatcaagatccgcggcgcacgcacgcacaacctgaaagacatcgacctggat ctgccgcgggagcggctcatcgtggtcaccggcgtctccggttcgggcaagtcgtcgctg gccttcgacacgctgttcgccgagggccagcggcggtatgtcgagagcctgtcgacctat gcgcgtcagttcctgtcgatgatggaaaagcccgacgtggatctgatcgagggactgtcg cccgcgatctcgatcgagcagaagagcacgtcgcacaacccgcgctccacggtcggcacc attaccgagatctacgattatctgcgcctgctgtttgcgcgcgcgggcgaaccgcgctgc ccggaacacgacgagaccctcgcggcccagaccatctcgcagatggtcgaccaggtgctg gcactgcccgccggagagcgcttgatgctgctggcaccgatcgtgcgggggcgcaagggc gagcacacccggcagttggaggcgatgcgcgcgcagggcttcctgcgtgcgcgcatcaac ggagagatcttcgaacttgatgcgttgccgccgatcgacccgaagcgcaagcacgacatc gagatcgtaatcgaccgtttcaaggtccgcgacgacctgcgccagcgcctggccgagtcg ttcgagaccgccaccgaactggccgagggactcgcgctggtcgcgtggatggacgagccg gaccgggcgccgttggtcttctccgcgcgctttgcgtgcccggtctgcggttacgccatc cgcgaactcgagccgcggctgttctcgttcaacaacccagccggcgcctgcccggcgtgc gacggccttggggtccgccagttcttcgaccccgaacgtgtcgtcgcgatgcccgaactg agcctcgcgggcggtgccgtgcgcggctgggatcgccggaacgcctggtatttcagcctg ctgaagagtctcgcgcggcattacggcttcgatgtcgagaccccctggttggatcttccc gcctcggtgcgtgcagtgatcctgcacggctccggcaccgagaaaatccggttcagccag caggggctcgacgggcgctcgcgcagcgaacagcggccgttcgagggcgtgatcccgaac ctcgagcgacgttaccgcgagaccgattccgccgcggtccgcgaggagctcggccggtat ctggccagccacgcgtgtccggaatgcgacggcgcgcgcctgaacaccgcggcccgccat gtcttcgtcaacggatccaaccttcctgccgtgacccggatgagtgtcgcggacgcccgc gccttcttccacgacctgcggctgcccgggaggtttgcccgcatcgccgacaagatcgtc cgcgagatcaacgcccggctcggctttctggtcgacgtcgggctcgattacctgaccctc gaccggtccgccgagacgctttccggcggcgaggcacagcggatccggctcgcctcgcag atcggttcggcgctggtcggcgtgatgtacattctggacgagccgtcgatcggattgcac cagcgcgacaacgagcgcctgctgcgcaccctgacgaacctgcgcgacctaggcaacacg gtcgtggtcgtggaacacgacgaggaggccatccggcgggcggatttcgtggtcgacatc ggtcccggagccggccgccacggtggcgcaatcgtcgccgccggcaccccggaaaaggtt gcacggcacccggaatcgctgaccggcgcctacctcaacggccggcgcgcgatcgcggtg cccgcccagcgccgtgatcccgaccccgagcgaattctcatggtccggggcgcccgcggc aacaacctcaaggacatcgacgccgccttcccggtcggcctgctgacctgcgtgaccggc gtatcgggttccggcaagtcgacgttggtcaacgacacgctgtatccggcggtcgcgaac gcactgcatcgcagcacgcacccggtcgccgcccacgcgggcatcgacggcctcgagtgg atcgacaaggtcgtcgacatcgaccagagtccgatcggacgcactccgcggtccaacccc gcgacctacaccggcctgttcacgccgatccgggaactgtttgccgcgaccgccgaggcc cgctcgcgcggctaccggcccgggcggttctcgttcaacgtgcgtggcggacgctgcgag gcctgccagggcgacggggtgatcaaggtggagatgcacttcctgcccgacgtcttcgta ccctgcgacgtctgtcgcggtcagcggtacaaccgcgaaacgctcgaggtgcgctacaag ggccgcaacatccacgaagtgctcgagatgaccgttgaggacgcactcgagttcttcgca ccggtccccgtcatccggcgcaagctggacacgctgatggacgtcgggctcgcatacatc cagctcggccagaacgccaccacgctttccggcggcgaggcgcagcgcatcaagctcgct cgcgaactctcgaaacgcgataccggacgcacgctctacatcctcgacgagcccaccacc ggcctgcatttccacgacgtcgagcaactgctcgcggtgctgcaccgcctgcgcgaccac ggcaacacgctggtcgtgatcgagcacaacctcgacgtaatcaagaccagcgactggctg atcgacatcgggcccgaaggcggcgaccacgggggccgcatcctgaccgccggagcaccg gaaaccgtcgctgcctgccgcgcgagccacaccgggcgcttcctggcccccatgctcgcg cccgcccgcgtacaccgcgcatga

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