Thioalkalivibrio nitratireducens: TVNIR_2612
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Entry
TVNIR_2612 CDS
T02408
Symbol
rsmH_[H]
Name
(GenBank) rRNA small subunit methyltransferase H
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
tni
Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tni03009
]
TVNIR_2612 (rsmH_[H])
Enzymes [BR:
tni01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
TVNIR_2612 (rsmH_[H])
Ribosome biogenesis [BR:
tni03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
TVNIR_2612 (rsmH_[H])
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_5
Methyltransf_24
Motif
Other DBs
NCBI-ProteinID:
AGA34253
UniProt:
L0DYX6
LinkDB
All DBs
Position
complement(2704775..2705707)
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AA seq
310 aa
AA seq
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METSLHTPVLLAPAVRGLAIRPAGRYVDGTFGRGGHSRAILDALDPQGRLLAMDRDPAAA
QAAAALEQDPRFAFRQGCFSSMADRVRQHWPGDGRVDGVLLDLGVSSPQLGAPERGFSFQ
QDGPLDMRMDPGAGIPASEWLNRAPEQAIADVIYRYGEERFSRRIARAIVAARQVEPLTR
TRQLAELVRRAVPRVEPGRHPATRTFQALRIHVNDELAELRTWLETVPGILRASARLVVI
SFHSLEDRLVKRAFQGRSDRPRLPRGLPVAAEPRPAPFRIIGKALRADADECRRNPRARS
AVLRIAEYQP
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggagacttcgctgcatacgcccgtactgctcgcaccggcggtacggggcctcgcgatt
cgtccggcgggccggtacgtggacggcactttcggccgtggcggccacagccgtgccatc
ctcgacgcgctcgacccgcaggggcggctgctggcgatggaccgcgatccggcggccgcg
caggcggcggccgctctggagcaggatccgcgcttcgcgttccgtcaggggtgtttttcg
agcatggctgatcgggtccggcaacactggcccggggacggccgggtcgatggcgtgctg
ctggacctcggggtctcatcgccgcagctcggtgcgccggagcggggcttcagcttccag
caggacggcccgctggacatgcgcatggatcccggtgcaggaattcccgcgtcggaatgg
ctgaatcgggcgccggaacaggcgatcgccgacgtgatctaccgctacggcgaggaacgc
ttctcccggcgcatcgcccgtgcgatcgtcgcggcccggcaggtcgagccgctgacgcgc
acccggcagctcgccgaactggtgcggcgtgcggtgccgcgggtcgaaccgggccggcat
ccggctacgcggactttccaggcgctgcggattcacgtgaacgatgagctcgccgaactg
cgaacctggctggaaaccgtccccgggatactgagggcgagtgcccggctggtcgtgatc
agtttccattccctggaggatcgcctggtcaaaagagctttccaggggcgttcggaccgg
ccccgccttccgcgcggcctcccggtggccgcagaaccccgtcctgcgccgttccggatc
atcggcaaggcgctgcgcgcggacgccgacgagtgtcggcggaatccccgggcccggtcg
gccgtgctgcgcatcgccgagtaccagccatga
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