Thioalkalivibrio nitratireducens: TVNIR_2693
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Entry
TVNIR_2693 CDS
T02408
Symbol
rfaF_[H]
Name
(GenBank) ADP-heptose--lipooligosaccharide heptosyltransferase II
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni00540
Lipopolysaccharide biosynthesis
tni01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
TVNIR_2693 (rfaF_[H])
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tni01005
]
TVNIR_2693 (rfaF_[H])
Enzymes [BR:
tni01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
TVNIR_2693 (rfaF_[H])
Lipopolysaccharide biosynthesis proteins [BR:
tni01005
]
Core region
TVNIR_2693 (rfaF_[H])
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
AGA34334
UniProt:
L0DXM3
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All DBs
Position
2780665..2781759
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AA seq
364 aa
AA seq
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MAPGLTFAHGPDPVQHFDPSAVYRMSARETDTPVLVVGPAWVGDMIMAQSLFITLSRTRP
GVAIDVIAPPWSLPILERMPEVRRAIPLPVAHGELALRRRWQLGRRLRAEGYAQAIVLPR
SAKAALPVFAAGIARRTGYRGEFRYGLLNDIRPLERARLYRTVDRFVNLGLEPDSAPPAP
LPEPRLRIAPAAAARTAAALGLNADTAPALALCPGAEYGPAKRWPEEHFARVARDRLAAG
WQVWLLGSDRDRAVTHAIAAAAPGAVDLAGRTTLAQAVDLLSLARAVVSNDSGLMHVAAA
VAAPVIALYGSSDPNYTPPLSGKARILSLGLDCSPCFRRECPLGHLNCLRQLAPERVITL
LDET
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
gtggcgccaggcctgaccttcgcgcatggaccagacccagtacagcacttcgatccttcc
gcggtataccgcatgagcgcacgcgagaccgatacgccggtactggtcgtgggccctgcc
tgggtaggcgacatgatcatggcccaaagcctgttcatcacgttgagccgcacccggccg
ggggtcgcgatcgacgtgatcgccccgccgtggagcctgccgatcctggagcgcatgcct
gaggtgcgtcgcgccatccccctgcccgtggcgcacggcgaactcgcgctgcgcagacgc
tggcagctcggccgccgcctgcgggccgagggctacgcgcaggcgatcgtgctgccacgc
tcggcgaaggcggccctgccggtgttcgccgcgggcatcgcgcgccgcaccggctaccgg
ggggagttccggtacgggctgctgaacgacatccgaccgctggagcgcgcacgcctctac
cgcaccgtagatcgcttcgtgaacctcggcctggaacccgattccgccccgcccgcgccg
cttcccgaaccgcggctgcggatcgccccggcagccgcggccagaacagccgctgcgctg
ggcctgaacgccgacaccgcgccggcactcgcactgtgcccgggcgccgaatacggcccc
gccaagcgctggccggaggaacacttcgcccgcgtcgcccgcgaccgcctcgccgccggt
tggcaggtctggctactcggatcggaccgcgaccgcgcggtgacccacgcgatcgcggcg
gctgctcccggggcggtcgatctcgccggacgcaccacgctggcgcaggcggtcgacctg
ctctcgctcgcccgcgccgtggtcagcaacgactcggggctgatgcacgtagccgcggcg
gtcgctgcgccggtgatcgcgctgtacggatcgtcggacccgaactacacgccgccgctg
agcggcaaggcgcggattctgagcctgggcctcgactgcagcccgtgcttccggcgtgaa
tgcccgctcgggcacctgaactgcctgcgccagttggcgcccgaacgcgtgatcacgctg
ctcgacgagacctga
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