Thioalkalivibrio nitratireducens: TVNIR_3049
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Entry
TVNIR_3049 CDS
T02408
Name
(GenBank) Membrane-bound lytic murein transglycosylase B precursor
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
tni
Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tni01011
]
TVNIR_3049
Enzymes [BR:
tni01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
TVNIR_3049
Peptidoglycan biosynthesis and degradation proteins [BR:
tni01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
TVNIR_3049
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Motif
Pfam:
SLT_2
PG_binding_1
PG_binding_3
PG_binding_2
CdiI_3
Motif
Other DBs
NCBI-ProteinID:
AGA34686
UniProt:
L0E213
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All DBs
Position
3142914..3144119
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AA seq
401 aa
AA seq
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MMIKILLPLTLSAALAPLALGATPGFEACIDEIREKAVDQGVDPGTADHVLNQVEHLERV
IDFDRRQPEFTTPFGDYLERRVTPQRVAQGRVLLHAHRALLDRVHAETGVPPAYLLALWG
MESNYGRHFGGISVPSALATLACDPRRGDYFTGELIAALHIIEEGAIPLGRMKGSWAGAM
GHVQFMPSVFLQYAVDGDGDGRRDLWNSVPDAMMSAGNFLAGLGWDGAYRWGREVLLPLG
FDYGQAGRTERRSLGEWRRAGVTDSSGQPVANLDIQAALLLPAGHRGPAFLVYDNFDVIM
GWNRSEFFALAVGHLADRIAGGGGLHTPPPADAPRMSRKQVIQLQTALNAMGYDSGEVDG
ILGPATRNAIRAYQQANDMIPDGFPDPNLLARLDIAASENL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
gtgatgatcaaaatcctgcttcccctgaccctgtccgcggccctggccccgctcgcgctc
ggcgcgacgccgggtttcgaggcctgcatcgacgaaatccgggaaaaggcagtcgaccag
ggtgtcgaccccgggaccgccgatcacgtgctgaaccaggtcgagcatctcgagcgggtc
atcgacttcgaccggcgacaacccgagttcaccaccccgttcggcgattacctcgagcgg
cgggttaccccgcagcgggttgcccagggccgcgtgctgctgcacgcacaccgtgcgttg
ctcgaccgcgttcatgcggaaacgggtgttccgcctgcctatctcctggccttatggggg
atggagtcgaactacggccgccacttcggtggcatctccgtaccgagtgcgctggccacg
ctggcctgcgacccccgccggggggactatttcaccggcgaactcatcgccgctctgcat
atcatcgaggaaggagcgattccgctggggcggatgaaaggttcctgggctggtgcaatg
ggccacgtgcagttcatgccgtcggtattcctgcagtacgcagtggatggcgacggcgac
ggccggcgtgacctctggaacagcgttccggacgcgatgatgtccgccggcaatttcctg
gccgggctcggctgggacggtgcctatcgctggggacgcgaggttctgctgccgctgggt
ttcgactacggccaggcaggccgtaccgagcgccgatcgctcggcgaatggcgccgggcg
ggcgtcaccgacagctcggggcaacccgtggccaacctagacatccaggccgccctgctg
cttcccgcagggcaccggggaccggcattcctggtatatgacaacttcgacgtcatcatg
ggctggaaccgctccgagttctttgcccttgccgtgggtcacctggccgaccggatcgca
ggcggtggcggtctgcacaccccgccgcctgccgatgcgccgagaatgtcgcgcaagcag
gtgatccagctccaaaccgcgctcaacgcgatgggctacgacagcggcgaggtggacggc
atcctcggaccagcaacgcgcaatgccatccgcgcctaccagcaggcaaacgacatgatt
cccgacggttttcccgaccccaacttgctggcccgactggacatcgcggcttccgagaac
ctgtga
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