Thioalkalivibrio nitratireducens: TVNIR_3088
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Entry
TVNIR_3088 CDS
T02408
Symbol
xseA_[H]
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TVNIR_3088 (xseA_[H])
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tni03400
]
TVNIR_3088 (xseA_[H])
Enzymes [BR:
tni01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
TVNIR_3088 (xseA_[H])
DNA repair and recombination proteins [BR:
tni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
TVNIR_3088 (xseA_[H])
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGA34725
UniProt:
L0E0I3
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All DBs
Position
3185085..3186500
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AA seq
471 aa
AA seq
DB search
MSQLNQQADRLLRTGLGSVWVEGEVSNLRRYASGHQYFSLKDAQASVSCTLFRGNARNAS
PFADGDRVVVFGRAGVYAARGQFQLVVERLESTGEGRLLLEFQRLKARLLAEGLFAPERK
RALPRWVHRLGVITSPQGDVQHDIARTLARRFPLLLPFRLYPVAVQGAGAAPQMVQALEQ
AGHEGAVDVLILARGGGSLEDLWAFNEEAVARAIADCPIPVVTGIGHETDATIADYVADL
SASTPTAAAEAVSPDARVLHRQLAETAARLERTLADRIRDRRRMLESLDARLQRAHPGRR
VEQHLQRVDELQQRLQRSIHRVFDTRRGRLRQLLLALRVHNPAHRILVHRGRLEQLRHRL
FQARPSRLLQTQQARLDGLRDRLAREIRHQLERETTRLEAAHGRLRALDPDAVLERGYSI
LLTHDQQVVRRAEPSLQGASLHARLASGRLDLHVEAVHPAGSRSGKPGSGT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgagccagctgaaccagcaggcagaccgcctgctgcgcaccggactaggctcggtctgg
gtcgagggtgaggtatcgaacctgcgtcgctacgcttccggacaccagtatttctcgctg
aaggacgcgcaggcgagcgtcagctgcacattgttccgcggcaacgcccgcaatgcctca
cccttcgccgacggtgaccgggtggtggtgttcgggcgtgcgggcgtgtacgccgcccgc
ggccagttccagctggtcgtcgaacgcctggagagcaccggcgaggggcgcttgctgctg
gagttccagcggctgaaggcacgcctcctcgccgaggggcttttcgcacccgaacgcaag
cgcgcgctgccccgctgggtgcaccggctgggggtgatcacctcgccgcagggtgacgta
cagcacgacatcgcacgcaccctggcgcggcgcttccccctgttgctgccgttccggctc
tacccggtcgcggtacagggtgcgggcgccgcgccgcagatggtacaggcgctggaacag
gcgggccacgaaggcgcggtcgacgtgctgatcctcgcccgcggcggcgggtcgctggaa
gacctgtgggccttcaacgaggaagccgtcgcccgcgcgatcgctgactgcccgatcccg
gtagtcaccggaatcgggcacgagaccgatgccacgatcgccgactacgtagccgacctg
agcgcctcgactccgaccgcagcggcagaggccgtgagccccgacgcgagagtgctgcac
cgccagctcgccgagacagccgcccgcctggaacgaaccctggccgatcgcatccgcgat
cggcggcggatgctggagtcgctcgacgcacgcctgcaacgcgcccacccgggccggcgc
gtggagcagcacctgcagcgcgtcgacgaactgcagcagcgcctgcaacgctcgatccac
cgagtgttcgacacccggcggggacggctgcgacagctgctcctcgcgttgcgggtgcac
aacccggcacaccggatcctggtgcaccggggccgactggagcagctgcgccaccggctg
ttccaggcccgcccgagccgcctcctgcagacgcagcaggcccggctcgacggtctccgc
gatcggttggcacgggagattcggcaccagctggagcgtgagacgacccggctcgaagcc
gcccacggtcggctgcgggccctggatccggatgcggtcctggagcggggttacagcatt
ctgctgacccacgaccagcaggtcgtacgcagggccgagccgtccctgcagggcgcctcc
ctgcacgcccgcctcgcgtcgggtcgactcgacctgcacgtggaggcggtgcacccagcc
ggcagccgctcaggcaagcccggctcggggacgtaa
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