Thioalkalivibrio nitratireducens: TVNIR_3099
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Entry
TVNIR_3099 CDS
T02408
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni03030
DNA replication
tni03430
Mismatch repair
tni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TVNIR_3099
03430 Mismatch repair
TVNIR_3099
03440 Homologous recombination
TVNIR_3099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tni03032
]
TVNIR_3099
03400 DNA repair and recombination proteins [BR:
tni03400
]
TVNIR_3099
Enzymes [BR:
tni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TVNIR_3099
DNA replication proteins [BR:
tni03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TVNIR_3099
DNA repair and recombination proteins [BR:
tni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TVNIR_3099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AGA34736
UniProt:
L0E257
LinkDB
All DBs
Position
3200140..3200847
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AA seq
235 aa
AA seq
DB search
MIRPGPWIFCWRRRRLALRLPDIPLRTYLKRRMPGLCGDCRDTPFLAVDLETTGLNPARD
QILSIGWVAMDGLSIRLETARQTWVRPSQAIPEASAVIHRITDDQAARGGSLGSALALLL
RALEGRVMLAHHAAVELGFLDRACVSEYGYPCMIPTVDTLRLAQEQLARRQEAVRSDGLR
LGALREQFNLPPYRSHDALSDALAAAELFCAQVSHRAGDGPLPLQQVLHRPGALW
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgatccgccccggcccgtggatcttctgctggcgccgccggcggctggccctgcgcctg
cccgatatcccgctgcgaacatacctgaaacgcaggatgccgggactgtgcggcgattgc
cgcgacacgccattcctggcggtggatctcgagaccactggcctgaaccccgcgcgcgat
cagatcctgagcatcggctgggtcgcgatggacggcctgtcgatccgcctggagaccgca
cgacagacctgggtgcgcccgtcgcaagcgattccggaggccagcgccgtcattcaccgt
atcaccgacgaccaggcggccaggggaggcagtctcggctccgctctggcactgttgctg
cgggcgctggaaggacgggtgatgctggcccaccacgcggccgtggaactgggtttcctg
gaccgcgcctgcgtgagcgagtacggatacccgtgcatgattccaaccgtggacacgctg
cgcctggcgcaggaacaactggcccgcaggcaggaagcggtccgctcggacgggctgcgc
ctcggggccctgcgcgagcagttcaacctgcctccctaccgctcgcacgacgcattgagc
gatgcactggctgcagccgagctgttctgtgcccaggtcagccaccgcgcgggcgacggt
ccgctgccgctgcagcaggtgctgcaccgcccgggtgccctgtggtga
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