Thioalkalivibrio nitratireducens: TVNIR_3135
Help
Entry
TVNIR_3135 CDS
T02408
Symbol
carB_[H]
Name
(GenBank) Carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni00220
Arginine biosynthesis
tni00240
Pyrimidine metabolism
tni00250
Alanine, aspartate and glutamate metabolism
tni01100
Metabolic pathways
tni01110
Biosynthesis of secondary metabolites
tni01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
TVNIR_3135 (carB_[H])
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
TVNIR_3135 (carB_[H])
00220 Arginine biosynthesis
TVNIR_3135 (carB_[H])
Enzymes [BR:
tni01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
TVNIR_3135 (carB_[H])
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
RimK
ATP-grasp_4
ATP-grasp_5
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
AGA34772
UniProt:
L0E0K1
LinkDB
All DBs
Position
complement(3239315..3242554)
Genome browser
AA seq
1079 aa
AA seq
DB search
MPKRTDIQSVLILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPET
ADAVYIEPVDWRVVARVIEKERPDALLPTMGGQTALNCALDLAREGVLKKYGVEMIGANE
DAIDMAEDRERFREAMTEIGLATPTAFIANTWDEAQKVQPEIGFPVIIRPSFTLGGSGGG
IAYNREEFEEIVKGGLDLSPTNEVLLEESVLGWKEFEMEVVRDKADNCIIICSIENLDPM
GVHTGDSITVAPAQTLTDKEYQILRNASIAVLRKIGVETGGSNVQFAVNPDDGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNDITGGLTPASFEPSIDYVVTKIP
RFTFEKFPQAQARLTTQMKSVGEVMAIGRTFQESLQKALRGLETGADGLDEKVDLNADDV
TERLRTLLGNPGPERIFNVADGFRAGLSIEDVFGLTAIDRWFLAQIHQLIEIERGVRDRF
LNDLSAAELFDLKRRGFSDRRLAKLLNETEKAVRKQRQALRVHPVYKRVDTCAAEFATTT
AYMYSTYEDESEAEPSDREKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC
NPETVSTDYDTSDRLYFEPLTLEDVLEIVAVEQPKGVIVQYGGQTPLKLARDLEAAGVPI
IGTSPDSIDLAEDRERFQHLLQKLDLRQPPNRTARSEDEAEKLAAEIGYPLVVRPSYVLG
GRAMEIVRDEDDLKRYMRDAVSVSNDAPVLLDRFLDDAIEVDVDAICDGQDVFIGGIMEH
IEQAGVHSGDSACSLPPFSLSDRLQDEMVEQVRRMALGLKVVGLMNTQFAIQGESIFVLE
VNPRASRTVPFVSKVVGLPLAKIAARCMVGQSLKGQNLHAPVRPDYYAVKEAVFPFAKFP
GVDPILGPEMKSTGEVMGVGRSFAEAFAKSQLGAGVRLPARGKAFVSVRDIDKNPALAKV
GRRLVELGFDVLATRGTAAFLQEQGVGVTVVNKVTEGRPHIVDMIKNDEVSFIVNTVEGK
QATADSFTIRREALMHKVSYTTTIAGALATVQALDHLEFENVFRLQDLHEEALRGRSEA
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcgtaccgacatccagagcgtgctgatcctcggcgccggtccgatcgtgatc
ggccaggcctgcgagttcgactactccggggcgcaggcctgcaaggcactgcgcgaggag
ggtttccgggtgatcctggtgaactccaacccggccacgatcatgaccgacccggaaacg
gccgacgcggtgtacatcgagccggtcgactggcgcgtggtcgcccgagtgatcgagaag
gaacggccggatgcgctgctgccgacgatgggcgggcagaccgcgctgaactgcgcgctc
gaccttgcgcgcgaaggcgtgctcaagaaatacggcgtggagatgatcggggcgaacgag
gacgcgatcgacatggcggaggaccgcgagcgcttccgcgaggcgatgaccgagatcggg
ctcgcgacgccgacggcctttatcgccaacacctgggacgaggcgcagaaggtgcagccc
gagatcggcttcccggtgatcatccggccatcgttcacgctcggcggctccggcggtggc
attgcctacaaccgcgaggaattcgaggagatcgtgaagggcggtctcgacctgtcgccg
accaacgaggtgctgctcgaggagtcggtgctgggctggaaggagttcgagatggaggtc
gtccgtgacaaggcggacaactgcatcatcatctgctcgatcgagaacctcgacccaatg
ggcgtgcacaccggtgattcgattaccgtggccccggcgcagacgctcaccgacaaggaa
taccagattctgcgcaacgcgtcgatcgcggtgctgcgcaagatcggcgtcgagaccggc
ggttccaacgtccagttcgcggtgaatcccgacgacggccgactgatcgtgatcgagatg
aacccgcgcgtctcgcgctcctcggcgctggcgtcaaaggcgaccggtttcccgatcgcg
aaagtggcggcgaagctcgcggtcggctacacgctggacgaactgcgcaacgacatcacc
ggcggtctgaccccggcgtcgttcgagccatcgatcgactatgtcgtcaccaagatcccg
cgcttcaccttcgagaagttcccgcaggcgcaggcccggctgaccacacagatgaaatcg
gtcggcgaggtgatggcgatcggccgcaccttccaggaatcgctgcagaaggcgctgcgc
ggcctggaaaccggcgcggacggcctcgacgagaaggtcgacctgaatgccgatgacgtc
accgagcggctgcgcacgttgctggggaaccccgggccggagcgcatcttcaacgtcgcc
gacgggttccgcgccggtctcagcatcgaggacgtgttcggactcaccgcgatcgaccgc
tggttcctggcccagatccaccagctgatcgagatcgagcgcggcgtgcgcgaccgtttc
ctgaacgacctgagcgccgccgagctgttcgacctgaagcgccgcggtttctccgaccgg
cgcctggcgaaactgctgaacgagaccgagaaggcggtgcgcaagcagcgccaggcgcta
cgcgtgcacccggtgtacaagcgcgtggacacctgtgccgcggaattcgcgacgaccacc
gcgtacatgtattcgacctacgaggacgagagcgaagccgagcccagtgaccgcgagaag
atcatggtactcggcggcggcccgaaccggatcgggcagggcatcgagttcgactattgc
tgtgtgcacgccgcgctcgcgatgcgcgaggacggctacgagacgatcatggtcaactgc
aaccccgagacggtctcgaccgactacgacacctccgaccggctgtacttcgagccgctg
acgctggaggacgtgctcgagatcgtcgcggtcgaacaaccgaagggcgtgatcgtgcag
tacggtggccagacgccgctgaagctcgcgcgcgacctcgaggcggccggcgtgccgatc
atcggcacctcgccggactcgatcgatctggccgaggaccgcgagcgcttccagcacctg
ctgcagaagctcgacctgcgtcagccgccgaaccgcactgcgcgcagcgaggacgaggcc
gagaagcttgccgccgaaatcggctacccgctggtagtaaggccgtcctacgtgctcggc
gggcgcgcgatggagatcgtgcgcgacgaggacgatctgaaacgctacatgcgcgatgcg
gtgtcggtgtccaacgatgccccggtgctgctcgaccgctttctcgacgacgcgatcgag
gtcgacgtcgacgcgatctgcgacggccaggacgtgttcatcggcgggatcatggaacat
atcgaacaggccggagtccattccggcgactccgcctgttcgctgccaccgttctcgctg
tccgaccggctgcaggacgagatggtcgaacaggtgcgccggatggcgctggggctgaag
gtcgttggcctgatgaatacccagttcgcgatccagggcgagagcatcttcgtgctggag
gtgaatccgcgcgcgtcacgcacggtaccgttcgtatccaaggtggtcggtctgccgctg
gccaagatcgcggcccgctgcatggtgggtcagagcctgaaggggcagaatctgcatgcg
ccggtgcgccccgactactatgcggtgaaggaggcggtgttcccgttcgccaagttcccg
ggcgtggacccgatcctgggcccggaaatgaaatccaccggcgaggtgatgggggtcggc
cgcagctttgccgaggctttcgcgaagagccagctcggcgccggggtgcgcctgccggcg
cgtgggaaggcgtttgtgtcggtgcgcgacatcgacaaaaatcccgcgttggcgaaggtc
ggccggcggctggtcgagctgggcttcgacgtgctggcgacccggggcaccgcggccttc
ctgcaggagcagggggttggggtgaccgtggtgaacaaggtcaccgagggccgcccgcac
atcgtcgacatgatcaagaacgacgaggtcagcttcatcgtgaacacggtcgagggcaag
caggcgaccgccgattcgttcacgatccggcgcgaagcactgatgcacaaggtcagttac
acgaccacgatcgccggcgcgctcgcgacggtgcaggcgctggatcacctggaattcgag
aacgtgtttcgactgcaggatctgcacgaggaggccctgcggggaaggagtgaggcatga
DBGET
integrated database retrieval system
