Thioalkalivibrio nitratireducens: TVNIR_3201
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Entry
TVNIR_3201 CDS
T02408
Symbol
lptF_[H]
Name
(GenBank) permease YjgP/YjgQ family protein
KO
K07091
lipopolysaccharide export system permease protein
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TVNIR_3201 (lptF_[H])
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tni02000
]
TVNIR_3201 (lptF_[H])
Transporters [BR:
tni02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
TVNIR_3201 (lptF_[H])
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
AGA34838
UniProt:
L0E0M0
LinkDB
All DBs
Position
complement(3317149..3318309)
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AA seq
386 aa
AA seq
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MAGGAVVLAVPRTRGGRRVIRPLLIERFLARDFLVTQAAVTAVLLLVIIGGVLGRVLRDV
AEGRIPLDVLPALVAFGSFKGLMLLWPVALFLSFLLVLGRMQRDSELIAMQAGGVSFARL
YRAIYLVAIPAALVLLFLMSFVVPRVEAMVDQLRDRADQRSDLVGITPGRFLRSRVGDQV
FFAESLTPDRQALLGVFIYHERADGIAEVTVATRAIAELHASARYLVLEDGHRYVGVPGE
GSFQMLDFDRLRMRVPDPTLAEPRRSLDGVPIAELWEQRHQPVFRGELEWRLAMPVSVLM
LALVALPLGLVPPRSGRYAAVPLAIVVYALYANLLIMGKSWVIVGQVPMWLGLWWVHLLP
LSVWLVLSWRRCLWPVLLRPMRDGSR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggccggtggggccgtcgtgctggcggttccgcgaacccggggcggtcgccgcgtgatt
cgtccgctgctgatcgagcgttttcttgcccgcgacttcctggtgacccaggccgcggtc
accgcggtgctgctgctggttatcatcggcggtgtgctgggccgtgtcttgcgcgacgtc
gcggaaggccggattcctctcgacgtactgccggcgctggtggcgttcgggtcgttcaag
gggctgatgctcctgtggccggtcgcgctgttcctgtcgttcctgttggtgctgggcagg
atgcagcgcgacagcgaactgatcgcgatgcaggccggcggcgtatctttcgctcgtctg
tatcgggcgatctacctggtcgcgattcctgcggcgctggtcctgttgttcctgatgtcg
ttcgtggtgccccgggtggaagcgatggtggatcagcttcgggaccgggcggaccagcga
tccgacctggtggggatcacgccgggcagatttctgcgctcgcgtgtgggtgaccaggtg
ttcttcgcggaaagtctgacgcccgaccgtcaggcgctgctcggcgtgttcatctaccac
gagcgtgccgatggtatcgccgaggtcacggtggcgacgcgggccatcgcggagctgcac
gccagcgcgcgctatctggttctggaggacggccaccgttacgtcggcgttccgggcgag
ggctcctttcagatgctggatttcgatcgcctgcgcatgcgcgtgccggatccaacattg
gcggagcctaggcgcagtctcgacggggttccgatcgcggagctctgggaacagcggcac
cagccggtgttccgtggggaactcgagtggcggctggcgatgccggtgtcggtgctgatg
ctggctctggtcgcgctgccgctggggctggtgcccccgcgcagcgggcgatacgcggcg
gtgccgctggcgatcgtcgtgtatgccctgtatgcaaacctgctgatcatgggcaagtcc
tgggtgatcgtcgggcaggtgccgatgtggctcgggctgtggtgggtgcacctgctgcca
ttgtcggtctggctggtgctgtcgtggcgccggtgcctgtggccggtcctgctccggccg
atgagggacggttcgagatga
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