Thioalkalivibrio nitratireducens: TVNIR_3275
Help
Entry
TVNIR_3275 CDS
T02408
Symbol
pcaH_[H]
Name
(GenBank) Protocatechuate 3,4-dioxygenase beta chain
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni00362
Benzoate degradation
tni01100
Metabolic pathways
tni01120
Microbial metabolism in diverse environments
tni01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
TVNIR_3275 (pcaH_[H])
00624 Polycyclic aromatic hydrocarbon degradation
TVNIR_3275 (pcaH_[H])
Enzymes [BR:
tni01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
TVNIR_3275 (pcaH_[H])
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dioxygenase_C
CarboxypepD_reg
Lipase_C
DUF4198
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
AGA34912
UniProt:
L0E101
LinkDB
All DBs
Position
complement(3390102..3390764)
Genome browser
AA seq
220 aa
AA seq
DB search
MSHHARVRRRLVLGGGAALLSLPLGAAQRVLTPGQAAGPFYPVTPPLHKDNDLTRVAGRS
ERAAGRISDLSGRVMEVDGRPLAGVRVEIWQCDANGRYRHPRDRHTAPADPNFQGFGHTV
TDAEGRYRFRIIRPVPYPGRTPHIHAAVFREGDSPFVTQIYVAGEPRNADDALFRQVPEH
LHPLLLADFQPVEDPVAELVASFDFVLSPSLVGLFGAPGA
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatcatgcgagagtgcgccggcggctggttctgggcggaggcgcggcgctgctg
tcgctgccgctgggggctgcgcagcgtgtcctgaccccggggcaggcggccgggccgttc
tacccggtgacgcccccgttgcacaaggacaacgatctaacccgggtcgccggccggtcc
gagcgggctgcgggccggatcagcgatctgtccgggcgggtgatggaggtggacgggcgg
ccgctcgcgggcgttcgtgtggagatctggcagtgcgatgcgaacggacggtatcggcac
ccgcgcgatcggcacactgcgccggcggacccgaacttccagggcttcggccatacggtg
acggacgccgagggccgctaccgcttccgcatcatccggcctgttccctaccccggccgc
acgccgcacatccacgcggcggtcttccgggagggtgactcgccgttcgtcacccagatc
tacgtggcgggcgaaccgcgcaacgcggacgatgccttgttccgccaggttccggagcac
ctgcacccgctgctgttggcggacttccagcccgtggaagaccccgtcgcggaactcgtg
gcatcgttcgacttcgtgctgtcgccatccctggtcgggttgttcggcgcgcctggcgcg
tag
DBGET
integrated database retrieval system
