Thioalkalivibrio nitratireducens: TVNIR_3402
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Entry
TVNIR_3402 CDS
T02408
Symbol
lpd_[H]
Name
(GenBank) Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni00010
Glycolysis / Gluconeogenesis
tni00020
Citrate cycle (TCA cycle)
tni00260
Glycine, serine and threonine metabolism
tni00280
Valine, leucine and isoleucine degradation
tni00310
Lysine degradation
tni00380
Tryptophan metabolism
tni00620
Pyruvate metabolism
tni00630
Glyoxylate and dicarboxylate metabolism
tni00640
Propanoate metabolism
tni00670
One carbon pool by folate
tni00785
Lipoic acid metabolism
tni01100
Metabolic pathways
tni01110
Biosynthesis of secondary metabolites
tni01120
Microbial metabolism in diverse environments
tni01200
Carbon metabolism
tni01210
2-Oxocarboxylic acid metabolism
tni01240
Biosynthesis of cofactors
Module
tni_M00009
Citrate cycle (TCA cycle, Krebs cycle)
tni_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
tni_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
tni_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
TVNIR_3402 (lpd_[H])
00020 Citrate cycle (TCA cycle)
TVNIR_3402 (lpd_[H])
00620 Pyruvate metabolism
TVNIR_3402 (lpd_[H])
00630 Glyoxylate and dicarboxylate metabolism
TVNIR_3402 (lpd_[H])
00640 Propanoate metabolism
TVNIR_3402 (lpd_[H])
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TVNIR_3402 (lpd_[H])
00280 Valine, leucine and isoleucine degradation
TVNIR_3402 (lpd_[H])
00310 Lysine degradation
TVNIR_3402 (lpd_[H])
00380 Tryptophan metabolism
TVNIR_3402 (lpd_[H])
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
TVNIR_3402 (lpd_[H])
00670 One carbon pool by folate
TVNIR_3402 (lpd_[H])
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tni04147
]
TVNIR_3402 (lpd_[H])
Enzymes [BR:
tni01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
TVNIR_3402 (lpd_[H])
Exosome [BR:
tni04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
TVNIR_3402 (lpd_[H])
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox_3
Pyr_redox
Lys_Orn_oxgnase
FAD_oxidored
FAD_binding_2
3HCDH_N
NAD_binding_8
FAD_binding_3
2-Hacid_dh_C
KN17_SH3
ApbA
GIDA
DUF6626
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AGA35038
UniProt:
L0E160
LinkDB
All DBs
Position
3514423..3515838
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AA seq
471 aa
AA seq
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MTGTFDLAVIGSGPGGYRAAVLGALRGLDVVLVERDRWGGCCLNRGCVPKKAWYHSARLI
ASQHTFAARGIRGSLAGDLAAAWNHQRGVVDRVRESYRAYLKHLKVETRAGHARFAGPGE
IDILGAEGSDTVRARHTIIATGAAPIVPEPFRLASARVLTTDDLFDRAPPAGARVAVIGS
GVVATEFAFILQLLGREVTWLSRSRPLARLGFSVQALTTLNERLQAQGIEPRRIRAYAKA
EIGRDTVAITTESGERFEVDWVLLGTGRQPVTADLGLERVGVGTDRRGFIERGPTLQTAA
AGVYAIGDVAGDSMTANHALSDATVAVANILGEDRRQDGRFVPTVVYSAVEMARLGLNED
MAEDEGHEPAVGFAAFETSPRALGQDEPEGFVRLIGDLDTGALLGGEIVGGDAGELIHLL
SLAPDRETALAWLARGTWNHPARAEEILNATETMAAKWQLQDPIFGRRHRR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
ttgaccggaaccttcgacctcgcggtcatcggcagcggaccgggcggctaccgcgccgcg
gtgctcggggccctgcggggcctcgatgtggttctcgtcgaacgggaccgctggggcggc
tgctgcctgaaccgcggttgtgtgccgaagaaagcctggtaccacagcgcgcgcctgatc
gcctcccagcacactttcgccgcccgcggcatccgcggcagcctcgccggcgatctcgcg
gccgcctggaatcaccagcgcggagtcgtcgaccgcgtccgcgaaagctaccgggcctac
ctgaaacacctgaaggtcgagacccgggccggacatgcgcggtttgccggtcccggagaa
atcgacatcctcggcgcggagggttccgatacggtgcgcgcccgccacacgatcatcgca
acgggcgcggcaccgatcgtgccggaaccgttccgcctcgcgtcagcgcgcgttctgacc
accgacgacctgttcgatcgcgcgcctcccgcgggcgcgcgggtcgcggtcatcggcagc
ggcgtggtggcgacggagttcgcgttcatcttgcagctgcttggccgcgaggtgacctgg
ctgtcgcgctcccgaccgctcgcgcgcctcggtttcagcgtccaggcactgacgaccctg
aacgaacgactgcaggcgcagggcatcgagccccggcggatccgggcttacgcgaaggcc
gagatcgggcgcgacacggtcgccatcacgaccgaaagtggcgagcgcttcgaggtcgac
tgggtcctgctcggcacggggcgacagcctgtgaccgccgacctgggcctggaacgggtc
ggggtcggcaccgaccgccgcgggttcatcgagcggggcccgacgctgcagacagcggcc
gccggtgtctatgcgattggcgacgtcgcgggcgactcgatgaccgcgaaccacgcgttg
tccgacgccaccgtcgcggtggccaacattctcggcgaggatcggcgccaggatggccgc
ttcgtgcccacggtcgtctacagcgccgtggaaatggcccgcctgggcctgaacgaggac
atggccgaggacgagggacacgagcctgccgtgggcttcgctgcgttcgagacctcgccc
cgggccctgggacaggacgaacccgaggggttcgtgcgcctgatcggcgacctggacacc
ggcgccctgctcggcggcgagatcgtcggcggcgacgcgggggaactgatccacctgctg
tcgctcgctcccgaccgcgagaccgcactggcgtggctggcacggggaacctggaaccat
ccggcacgcgccgaggaaatcctgaacgccaccgagaccatggccgcgaaatggcagctg
caggatccgattttcggccggcgccaccgccgctga
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